Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028667.1 Length=39593 Score E Sequences producing significant alignments: (Bits) Value seq31597 100 7e-17 >seq31597 Length=15385 Score = 100 bits (110), Expect = 7e-17 Identities = 224/335 (67%), Gaps = 6/335 (2%) Strand=Plus/Plus Query 28187 ACCACTGCGATTGCTATGCAGGAGGCGACTGGTAAGGCCGTTTCTGAAACCGTGGCCGAG 28246 ||| | || ||||| ||| | ||||| || || || |||||||| || || || || ||| Sbjct 7607 ACCGCAGCAATTGCGATGGAAGAGGCCACCGGGAAAGCCGTTTCCGAGACGGTTGCTGAG 7666 Query 28247 TTCTCCAAGCTGGCCGATGATCCGGTCAAGGCGTCGCAGCAGCTCAATGACCGCTATCAC 28306 ||| |||||||| || || |||| | ||||| | |||| || || | || || Sbjct 7667 TTCAAGAAGCTGGCTGACGAGCCGGCCGCTGCGTCTGCGAAGCTGAACGAGCAATACAAC 7726 Query 28307 TACCTGACGGCCTCGGTGTACGAGCAGATCACTGCCCTGGAGAGGCAGGGGGACACGCTG 28366 ||||| || || |||||||||| || || | ||||| || ||| || ||| | || Sbjct 7727 TACCTCACCGCTTCGGTGTACGCCCAAATAGCAGCCCTTGAAGCGCAAGGCGACGCCGTG 7786 Query 28367 GGTGCTGCCCAGT---TCGCCATGGACGCCTATAGCCAGGCTATGGACGAGCGGGCGAAT 28423 || || |||| | ||||| || | | || | || ||||| || || ||| Sbjct 7787 GGCGC---CCAGGAACTGGCCATCGAGACATTCGGCGATGCCATGGAACGCCGCGCCAAT 7843 Query 28424 CAGATCGTCGAGAACCTGGGCACGATGGAGCGCGCGTGGAGGACTGTTGGCGACATCGCA 28483 ||||||| | ||||| ||| ||| || | || |||| | | || |||| Sbjct 7844 CAGATCGAGGGCAACCTTGGCCTGATCGAACAGGCATGGAAAGGTATCAAGAACGTCGCT 7903 Query 28484 AAAGGTGCATGGGACGAGATGCTCGGCGTGGGCCG 28518 | | || |||||||||||||| ||| | ||||| Sbjct 7904 AGCGAGGCGTGGGACGAGATGCTTGGCATCGGCCG 7938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126305089070760