Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq5 221 1e-52 seq100896 86.0 7e-12 >seq5 Length=869209 Score = 221 bits (244), Expect = 1e-52 Identities = 330/466 (71%), Gaps = 2/466 (0%) Strand=Plus/Minus Query 128588 GGGACTGAACAATGTGATGTAATCATTCTTAATCAAACGTTCAATCATCAGGTTATTAAT 128647 ||| |||||||| ||||| || |||| ||||||| || | | ||||||| |||| Sbjct 711217 GGGGCTGAACAAGGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAA 711158 Query 128648 CTGAACACCATAATCTAAATGACGAATACGGTTTTCATCTACACCTTTGTTGTTCTTAAG 128707 ||| || ||||| || | ||| | | ||||| || |||||||| ||| || || || Sbjct 711157 CTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAG 711098 Query 128708 TACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCGCCACC 128767 ||| || || ||| ||||||| ||||| | || ||| |||| || || || ||||| Sbjct 711097 TACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACC 711038 Query 128768 ACGGACTCCGCCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGCTTCCAGAAAGGAAT 128827 ||| || |||||||| |||||| ||| ||||| || ||||| ||||| | || || || Sbjct 711037 ACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGAT 710978 Query 128828 AACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCTTCTGCACGAATCATACC 128887 | |||||||| | |||| || | ||| |||| || ||||| || Sbjct 710977 ACAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCC 710918 Query 128888 TGCATTAATACCAATACCTGCACGCTTACTGATGTATTTTGTAATTGACGCAGCAGCT-T 128946 ||| ||||||||||||||||| |||| | ||||||| || || | | | || | Sbjct 710917 TGCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAA-TGGCACTGGAGGTGG 710859 Query 128947 CGTTAATTGAATTAAGACTATCACCGCCTTCAATAACCACGCATGAACTAAACTGACGTG 129006 | || || |||| || || ||||| | ||||| | ||||| || || |||||||| | Sbjct 710858 CATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGG 710799 Query 129007 TCGGAGTACGAACACCAGACATAATTGGAGTTGGCAATGAAATCTT 129052 | || ||||| || || |||||||| || || |||| ||||||||| Sbjct 710798 TTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCTT 710753 >seq100896 Length=2131 Score = 86.0 bits (94), Expect = 7e-12 Identities = 108/148 (73%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 126595 ATGTACTGTGTGCCCTTCAAATGAAGCTGTTCATCACGAGCAATGAACTTCATGATTTTA 126654 |||| ||||||||| || || | | ||||||||| || || | ||| |||||||| Sbjct 1272 ATGTGCTGTGTGCCAGATAAGTGTAACGCTTCATCACGGGCGATTAGCTTGATGATTTTT 1213 Query 126655 GCATTACCTTCCATGATTTCCATATTTTTATGGAAGTTGAAGGTACATGCAAAACTAACA 126714 |||||||||||||| | ||| | | | ||| || | ||| ||||| || ||| Sbjct 1212 GCATTACCTTCCATCAATTC---ACGCTCAGCGAAAGCAAATGAACAAGCAAAGCTTACA 1156 Query 126715 TAGAAACGAATAGCTTCTAATGCGTTAA 126742 ||||||||||| |||||||| ||||| Sbjct 1155 TAGAAACGAATCGCTTCTAAGATGTTAA 1128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530874864782880