Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028688.1 Length=40114 Score E Sequences producing significant alignments: (Bits) Value seq34826 116 9e-22 >seq34826 Length=13225 Score = 116 bits (128), Expect = 9e-22 Identities = 275/412 (67%), Gaps = 14/412 (3%) Strand=Plus/Minus Query 14357 TAGACCTCATCGTTAAGACCCATGAGGAAAACTACGCG--GCCCGT--CTGGAAGCGCAC 14412 |||||| |||||| || | ||| |||| |||||||| || ||| ||| || || Sbjct 8748 TAGACCGCATCGTGAAAATCCACGAGGCCGACTACGCGAAGCGCGTGACTG--AGTTCAA 8691 Query 14413 GAAGCGAACCCGCCGAAGGTTCAGAAGGGTAAGAAACCTCTGAAGCCGTATGAAGGCGAC 14472 |||| ||||| ||| || | | | | ||| || || |||||||| |||||||| Sbjct 8690 GAAG--AACCCTCCGCAGACGCCAAGTGCCAGGAAGCCACTCCAGCCGTATCAAGGCGAC 8633 Query 14473 ATGCCGTTCTTCGACAACGGCGATGGTACCACCACGTTCAACTTCAAGTGCTACGGTTCG 14532 |||| ||| |||||||||| || || |||| | | |||||||| | ||| | | Sbjct 8632 CTGCCCTTCATCGACAACGGTGACGG------CACGGTGACCTTCAAGTTCGTCGGCTGG 8579 Query 14533 TACGAGGACAAGAAGACTGGCGAGACCAAGAAGATTGTTCTGGGCGTAGTAGACGCGAAG 14592 | || ||||| ||||||| | ||| ||| | || || ||||| ||| Sbjct 8578 GCCAGCTACGAGAAGGACGGCGAGATGATCCCGATCCCCCTGCGTGTCGTTGACGCCAAG 8519 Query 14593 GGCAAGCGCATTCAGGACGTTCCCATTATCGGCGGTGGCTCCAAAGTGAAGATTCGCTTC 14652 |||||| ||| || || || | ||| ||||||||| | | ||| | |||||| Sbjct 8518 GGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTCCGAGGGCAAGGTCCGCTTC 8459 Query 14653 TCTCTGGTACCGTACGGCTGGTCTGCGGTAGCTGGCGCTTCCGTTAAGTTGCAGCTGGAA 14712 || | || || ||||||||| || | ||||| ||||| ||| | || |||||| Sbjct 8458 TCCATCGTCCCCTACGGCTGGAACCCGACCGTGGGCGCCTCCGTGAAGCTCCAACTGGAA 8399 Query 14713 GGCGTGATGTTGGTCGAACTGGCTACCTTTGGTGGTGGCGAAGACGACTGGG 14764 ||| | ||| || | |||||| | | || ||| |||||||||||| Sbjct 8398 GGCTTCATGCTGACCAAACTGGTCGAGTCAGATGATGGTCAAGACGACTGGG 8347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127968720758432