Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028699.1 Length=40740 Score E Sequences producing significant alignments: (Bits) Value seq11269 179 1e-40 >seq11269 Length=54388 Score = 179 bits (198), Expect = 1e-40 Identities = 297/429 (69%), Gaps = 36/429 (8%) Strand=Plus/Plus Query 26924 TTCGACAATGCGTTCGGCCTCATCCTTGTCGTAGATGCCTGCGAAACCGAAGGCAAGACG 26983 ||| || || || |||||||| |||| |||||| ||||| ||||| ||||| || || || Sbjct 43124 TTCAACGATCCGCTCGGCCTCGTCCTGGTCGTATATGCCGGCGAACCCGAACGCGAGGCG 43183 Query 26984 GGCGCACTGGATCATTGCTTTGTGTCGCAACATCCGTTTGGGATGTGACTGCCACGGTCC 27043 |||||||| |||||||| ||||| |||||||| || || || || |||||||| || Sbjct 43184 TGCGCACTGAATCATTGCCTTGTGGCGCAACATGCGCTTCGGGTGCGACTGCCATGG--- 43240 Query 27044 AGTAATCTCACGACCATCACGGGTTTTGAATGGTTCCCGGCGACATTCATCCATCCATTC 27103 || |||| ||| | || ||| || ||| | || Sbjct 43241 ------CT------------GGGTGTTGC--GCTT-------ACACTCCGACATGTACTC 43273 Query 27104 GGTAACGCAGATCGGATGGTTACGGTCCTTACGGTAAATCCTGCA--TGTACATGATTC- 27160 ||| | | | |||| || |||||||| || || | || | ||| ||||| | ||| Sbjct 43274 GGTGATGGTGGTCGGGTGCTTACGGTCTTTCCGATGGATTCGGCAGGTGTACTCGCTTCC 43333 Query 27161 GTTATCCTGC---TCAAAATCCATACCGTCAAACTGCTGGTTTTCGTTGATGATACGGGA 27217 || | || || || |||||||| || || |||||| ||| |||||||||||| || || Sbjct 43334 GTCAGCCGGCATCTCGAAATCCATGCCATCGAACTGCGGGTGTTCGTTGATGATCCGCGA 43393 Query 27218 CCAGCCATCAACACCCACCACAGGGACGATCCCGTTCTGCTTATCAGGAAAGGCGTAAAT 27277 |||||| || | || || || || || || ||||| | ||| || || |||||||| | Sbjct 43394 CCAGCCGTCCAGGCCAACTACCGGCACAATGCCGTTGTTCTTGTCGGGGAAGGCGTACAA 43453 Query 27278 TTCTTTCGTCCACGGATTAAGACCGTACTGGTTGGCGACTATCAGTAGCGCAATAAACTG 27337 ||||| || | || || || |||||||| ||| || ||||| || |||| | ||| Sbjct 43454 CTCTTTGGTGAAGGGGTTCAGCTTGTACTGGTCGGCTACGATCAGCAGGGCAACCATCTG 43513 Query 27338 CGCATCACT 27346 ||| ||||| Sbjct 43514 CGCGTCACT 43522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129967633304464