Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028772.1 Length=39133 Score E Sequences producing significant alignments: (Bits) Value seq34826 118 3e-22 >seq34826 Length=13225 Score = 118 bits (130), Expect = 3e-22 Identities = 197/285 (69%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 29592 GTCAAGAAGCACGCTATGGATAAGGCGTACGGTATCAGTCACACCGACCAGTTCAACGCT 29651 ||| ||||| |||| | || |||||||| || ||||| ||| |||||| |||| ||| Sbjct 5920 GTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACTCCGACCGCTTCACGGCT 5861 Query 29652 TCCAGTGTCATTGACGACAACATTACGGGTCTTGTAGGTATCGAGAACAACTCATTCCTA 29711 | | | || || || | | || | ||| | ||||||||| | ||| Sbjct 5860 GACTCGCTGGTAGAGGAGCACCTGAAGGACGGGGCAGGCCTGGAGAACAACGACTACCTC 5801 Query 29712 GAAGCTCGTAACTTGTTCGACAGCGACATGCCTATCACCCTTCCTGACGGTCAGACGTTC 29771 |||||||||||| | |||||| ||| ||| | |||||| |||||||| ||| ||||| Sbjct 5800 GAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCGCCTGACGGCCAGCCGTTC 5741 Query 29772 TCTGTGAACGACCTGAGGGATTACGATATGTTCCGCATCATGCCAGCGTATGACCGCCGT 29831 ||||||| ||||| | || | | | || | || | | || ||| |||||| | Sbjct 5740 GCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTCCCGCAGTACGACCGCAGG 5681 Query 29832 ATTAACGGTGACATTGCAATCATGGCGGGTACCGGGAAGACCACC 29876 | ||||||||||| || |||||| || ||||||||| |||| Sbjct 5680 GTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAGGACACC 5636 Score = 105 bits (116), Expect = 2e-18 Identities = 117/154 (76%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 7233 CATCGTGGACACCCATGAAGCTCACTACGCTGAGCGCGTGGCTGAGTACAATGAGAACCC 7292 ||||||| | | ||| || || ||||||| |||||||| |||||| ||| ||||||| Sbjct 8741 CATCGTGAAAATCCACGAGGCCGACTACGCGAAGCGCGTGACTGAGTTCAAGAAGAACCC 8682 Query 7293 GCCTCAG--GTCCAGCGCGGTAAGAAACCTCTGCTGCCGTATGAAGGCGACCTTCCGTTC 7350 || ||| | | || || | ||| || || | ||||||| |||||||||| || ||| Sbjct 8681 TCCGCAGACGCCAAGTGCC--AGGAAGCCACTCCAGCCGTATCAAGGCGACCTGCCCTTC 8624 Query 7351 ATCGATAACGGTGACGGTACGACTACCTTTAAGT 7384 ||||| ||||||||||| ||| ||||| |||| Sbjct 8623 ATCGACAACGGTGACGGCACGGTGACCTTCAAGT 8590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124836239596040