Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028780.1 Length=167124 Score E Sequences producing significant alignments: (Bits) Value seq5 127 2e-24 >seq5 Length=869209 Score = 127 bits (140), Expect = 2e-24 Identities = 270/403 (67%), Gaps = 0/403 (0%) Strand=Plus/Plus Query 22792 AGATTTCATTGCCAACTCCTATTATGGCTGGTTGTCGTACTCCGACTCGACAGTTTAGTT 22851 |||||||| |||| || ||||||||| | || ||||| || || || ||||| || | Sbjct 710754 AGATTTCACTGCCGACACCTATTATGTCGGGCGTGCGTACCCCAACCCGTCAGTTCAGCT 710813 Query 22852 CATGCGTTGTTATTGAGGCAGGTGATTCATTAAAGTCTATCAATAAGGCTTCCGCTTCAA 22911 | ||||| | |||||| ||||| | | || |||||| | ||| | | | Sbjct 710814 CCTGCGTACTGATTGAGTGTGGTGACAGCCTGGATTCGATCAATGCCACCTCCAGTGCCA 710873 Query 22912 TTGTTGAATATATCTCTAAACGCGCTGGAATTGGTATTAACGTTGGTATGATTCGTGCCG 22971 |||| |||| | || | ||||| || ||||||||||||| || ||||| || Sbjct 710874 TTGTAAAATACGTGTCGCAGCGCGCAGGTATTGGTATTAACGCAGGCCGTATTCGCGCTT 710933 Query 22972 AAGGTTCTAAGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAAC 23031 |||| || | | || |||| |||||||| ||| || |||| || | Sbjct 710934 TAGGTAGCCCAATCCGTAATGGCGAAGCCTTTCATACTGGCTGTATCCCGTTTTATAAGC 710993 Query 23032 ATTTTCAGACTGCTGTTAAATCATGTTCACAGGGCGGAATTCGTGGTGGCGCTGCTACTG 23091 |||| ||||| || || ||| || || || ||||| | |||||||| || || || Sbjct 710994 ATTTCCAGACCGCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCC 711053 Query 23092 CTTATTATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAAG 23151 | || || | |||||| ||||||| ||| || || || ||||||||||| | Sbjct 711054 TGTTCTACCCCTTGTGGCATCTGGAAGTGGAATCGCTGCTGGTACTGAAAAATAACCGCG 711113 Query 23152 GTGTAGAAGAAAACCGCATTCGTCATATGGATTATGGTGTTCA 23194 |||||||||| ||||| | | ||| |||| ||||| || || Sbjct 711114 GTGTAGAAGAGAACCGGGTAAGGCATCTGGACTATGGCGTGCA 711156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533464217927040