Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq4 383 8e-102 seq14 217 7e-52 seq22220 116 2e-21 >seq4 Length=924746 Score = 383 bits (424), Expect = 8e-102 Identities = 638/917 (70%), Gaps = 15/917 (2%) Strand=Plus/Plus Query 63983 GCCCTGGCCGAGGTCGATAAACGCTTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAG 64042 || |||||| || |||| |||| |||||| || |||| ||| || || ||| || Sbjct 25877 GCGCTGGCCCAGATCGAGAAACAGTTCGGCAAGGGCTCGGTCATGCGCCTCGGCGACCAG 25936 Query 64043 CCACAGACTGTGGACGTC------ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTG 64096 || | || | | | || ||| |||| ||||| | | |||||| ||| ||| Sbjct 25937 CCTGACACGGGCGCCATCCCGGCCATTTCCACAGGCTCGCTGGGGCTGGACATCGCCCTG 25996 Query 64097 GGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGG 64156 |||||||| || || | |||||| | || || ||||||||||| || || || || Sbjct 25997 GGCATCGGCGGCCTGCCCAAGGGCCGCATCGTCGAGATCTACGGCCCCGAGTCCTCGGGC 26056 Query 64157 AAGTCAACTCTGTGTCTCCACGCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGC 64215 ||| | || ||| || || | | ||| ||| ||| |||||||||| ||||| Sbjct 26057 AAGACCACGCTGACCCTGCAGGTCATCGCCGCCTGC-CAGCGCGCCGGTGGCACGGCCGC 26115 Query 64216 CTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGC--GCTCGGTGTGGAC 64273 || | ||||||| ||||| | ||||| || |||||| ||| |||||| || | Sbjct 26116 CTTCGTCGACGCCGAGCATGCGCTGGATCCGCTCTACGCC--GGCAAGCTCGGCGTCAAT 26173 Query 64274 CTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGAC 64333 |||| |||| ||||| ||||||||||| ||||||||||| ||||| ||| ||| Sbjct 26174 GTCGAGGACCTGCTGGTGTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCACCGAC 26233 Query 64334 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTG 64393 | || || || |||| | | |||| |||| || ||||| || || || || | Sbjct 26234 ATGCTGGTGCGCTCGGGCGCGGTCGACATCATCGTTGTCGACTCCGTCGCCGCGCTCACG 26293 Query 64394 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 64453 ||||||||||| |||| || || || || |||| ||||||||||| || || |||||| Sbjct 26294 CCGCGCGCCGAAATCGAGGGTGAAATGGGCGACATGCACGTCGGCCTCCAGGCTCGCCTC 26353 Query 64454 ATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTC 64513 ||||||||||| |||||||| ||||||||| |||| | ||||| ||| || Sbjct 26354 ATGTCGCAGGCGCTGCGCAAGATCACCGGCAACATCAAGCGTTCCAACTGCCTGGTCATC 26413 Query 64514 TGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACC 64573 | |||||||| | ||| |||||||||| | || | | |||| || |||||| Sbjct 26414 TTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCG---GAAACCACC 26470 Query 64574 ACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCC 64633 || |||||||| || | | |||||||||||| || ||| | || |||| ||||||| | Sbjct 26471 ACCGGCGGCAACGCGCTCAAGTTCTACGCCTCGGTGCGCCTCGACATCCGACGCATCGGC 26530 Query 64634 ACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAAC 64693 | | ||||||||||| || | ||||| ||||| || ||||| ||||||||| Sbjct 26531 GCGGTCAAGGAAGGCGAAGAAGTGGTCGGTTCGGAAACCCGCGTCAAGGTGGTCAAGAAC 26590 Query 64694 AAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG 64753 ||| || | |||||| | | | ||||||||| || | ||||| |||||||| Sbjct 26591 AAGGTGTCGCCGCCGTTCAGGGAGGCCGAGTTCCAGATCCTCTACGGCCAGGGCATCAAC 26650 Query 64754 CGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCC 64813 || ||| ||| || ||||||||| |||| || || ||||| | ||||| |||||| Sbjct 26651 CGCCAGGGCGAGATCGTCGACCTGGGCGTGAAGCTCGGTCTGGTCGACAAGTCCGGCGCC 26710 Query 64814 TGGTTCAAGTACGGGGACAAGAACGTCGCCCAGGGCAAGCCCAAGGCCGTCCAGTGGCTC 64873 |||| | ||| || ||| || ||| ||||||||| ||| ||| | ||| || Sbjct 26711 TGGTACGCCTACCAGGGCAACAAGATCGGGCAGGGCAAGGGCAATGCCTGCAAGTTCCTG 26770 Query 64874 AAGGCCAACCCGGACAT 64890 || |||||||| || Sbjct 26771 CTGGAGAACCCGGATAT 26787 >seq14 Length=669857 Score = 217 bits (240), Expect = 7e-52 Identities = 457/678 (67%), Gaps = 15/678 (2%) Strand=Plus/Plus Query 64082 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 64141 || ||| ||| ||||| ||||| || | |||| |||||| | || ||||||||||| Sbjct 599864 CTCGACATCGCGCTGGGGATCGGCGGATTGCCGAAGGGCCGCATCGTCGAAATCTACGGG 599923 Query 64142 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 64201 || ||| || || ||| | || ||| || || | ||||||| | | |||||| Sbjct 599924 CCGGAAAGCTCCGGTAAGACCACGCTGACGCTGCATGTGGTGGCCGAAGAGCAGAAAAAG 599983 Query 64202 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 64261 ||||| | ||||| | | || || || || | |||||||| || || | Sbjct 599984 GGTGGTGTCTGCGCCTTCGTAGATGCCGAACATGCGCTGGACCCGATCTATGCGCGTAAG 600043 Query 64262 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 64321 || ||||| |||| || | || || | ||||| ||||||||||| ||||| || Sbjct 600044 CTGGGTGTCAACCTTGATGAACTGCTGATCAGCCAGCCCGACACTGGCGAACAGGCGCTT 600103 Query 64322 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 64381 || |||||||| || || || || | || | |||| || || ||||| || Sbjct 600104 GAAATCGTTGATACGCTGGTGCGTTCGGGTGCCGTGAGCCTCGTGGTGGTCGACTCGGTC 600163 Query 64382 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTG 64441 || || ||| ||| ||||| ||||||||||||| || ||| | |||||| Sbjct 600164 GCTGCGCTGACCCCGAAATCCGAGATCGAAGGCGACATGGGCGACGCTACTGTCGGCGCC 600223 Query 64442 CACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA- 64500 || || || || ||| ||||||||||||||||| || | | | ||| | || | || Sbjct 600224 CAGGCCCGACTGATGAGCCAGGCCATGCGCAAGCTGACGGCCTCGATCGGCCGCTCGAAT 600283 Query 64501 --CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG---GGCTAC 64555 || | | | ||| |||||||| | || |||||||||| || ||| || Sbjct 600284 TGCATGGTCA---TCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTTGGCAAC 600340 Query 64556 GGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATG 64615 |||||| |||||||| || ||| | || ||| ||||| ||| ||||| || Sbjct 600341 --CCCGAA----ACCACCACCGGTGGCCATGCGCTGAAATTCTATGCCAGCGTCCGTCTG 600394 Query 64616 GATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGG 64675 || | |||||||||| | || ||||| |||| |||| || |||||| ||||| Sbjct 600395 GACATTCGTCGCATCGGCTCCATCAAGGATCGCGACGAGGTGGTTGGCAACTCGACCCGC 600454 Query 64676 GTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTG 64735 ||||||||||| ||||||||| ||||||||||| | | | ||| ||| || || Sbjct 600455 GTGAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAACAGGTCGAATTCGATATCATG 600514 Query 64736 TACGGGGAGGGCATCTCG 64753 || || |||||||||||| Sbjct 600515 TATGGCGAGGGCATCTCG 600532 >seq22220 Length=23789 Score = 116 bits (128), Expect = 2e-21 Identities = 221/320 (69%), Gaps = 8/320 (3%) Strand=Plus/Plus Query 62447 TGACTGAACTCAAAGACACCAACCCCAAGGACGCCGTAGGCACCGCCAAGGTCCCGTACT 62506 || ||||||| |||||||||||||| || |||||| | |||| | ||| | || || Sbjct 17756 TGGCTGAACTGAAAGACACCAACCCGAAAGACGCCATCGGCAGCCAGAAGTTGCCT--CT 17813 Query 62507 CCAC--GATCCCCGCTCGGGTGGTCGCCGAGGTCGGCCTGGCAATGATGGAAGGCGCCCT 62564 ||| | || | | | ||| || | |||||| ||||||| || || || Sbjct 17814 GCACCTGTGGCCAACGACCGCGACCGCGATGGGCTGCCTGGGGCTGATGGATGGTGCTCT 17873 Query 62565 GAAGTACGGCCGCCACAACTACCGCGTCTCCGGTGTCCGCGCTTCGGTCTACTACGACGC 62624 |||||| ||||| ||| | ||| | || || || || ||| |||||| ||| || Sbjct 17874 GAAGTATGGCCGGGCCAATTGGCGCAAGGCTGGGGTGCGGGCCTCGATCTACTTCGATGC 17933 Query 62625 CGCCAAGCGCCACCTGGACGCCTGGTGGGAGGGTCAGGATATCGACCCCGACAGCGGCCT 62684 |||||| || ||||| | || |||| |||||| |||| |||||| |||||||| || Sbjct 17934 CGCCAACCGGCACCTTGCTGCGTGGTTCGAGGGTGAGGAGGCCGACCCGGACAGCGGGCT 17993 Query 62685 GCCGCACCTCGTGAAAGCCATCGCCTGCCTTGTGGTCGTCCGCGACAGCGAGATTCAGGG 62744 ||||||||| | | | || | || ||||| | | || || |||| || ||| ||| Sbjct 17994 GCCGCACCTGGCGCATGCGCTGGCGTGCCTGGCGATCATCGTCGAC-GC-AGAGGCAGCC 18051 Query 62745 CAACTG--GGAGGATGACCG 62762 | ||| || ||||||||| Sbjct 18052 GACCTGCTGGTGGATGACCG 18071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232291818379796