Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028800.1 Length=41698 Score E Sequences producing significant alignments: (Bits) Value seq34826 98.7 3e-16 >seq34826 Length=13225 Score = 98.7 bits (108), Expect = 3e-16 Identities = 253/382 (66%), Gaps = 14/382 (4%) Strand=Plus/Minus Query 9252 TAGACCTCATCGTTAAGACCCATGAGGAAAACTACGCT--GCTCGT--CTGGAAGCACAC 9307 |||||| |||||| || | ||| |||| ||||||| || ||| ||| || || Sbjct 8748 TAGACCGCATCGTGAAAATCCACGAGGCCGACTACGCGAAGCGCGTGACTG--AGTTCAA 8691 Query 9308 GAAGCTAACCCGCCTAAGGTTCAGAAGGGTAAGAAGCCCCTGAAGCCGTACGAAGGCGAC 9367 |||| ||||| || || | | | | |||||| || ||||||| |||||||| Sbjct 8690 GAAG--AACCCTCCGCAGACGCCAAGTGCCAGGAAGCCACTCCAGCCGTATCAAGGCGAC 8633 Query 9368 ATGCCGTTCTTCGACAACGGTGATGGTACCACCACGTTCAACTTCAAGTGCTACGGTTCA 9427 |||| ||| ||||||||||||| || |||| | | |||||||| | ||| | Sbjct 8632 CTGCCCTTCATCGACAACGGTGACGG------CACGGTGACCTTCAAGTTCGTCGGCTGG 8579 Query 9428 TACGAGGACAAGAAGACTGGCGAGACCAAGAAGATTGTTCTGGGTGTAGTAGACGCGAAG 9487 | || ||||| ||||||| | ||| ||| |||| || ||||| ||| Sbjct 8578 GCCAGCTACGAGAAGGACGGCGAGATGATCCCGATCCCCCTGCGTGTCGTTGACGCCAAG 8519 Query 9488 GGCAAGCGCATTCAGGACGTTCCGATTATCGGCGGCGGTTCCAAAGTGAAGATTCGCTTC 9547 |||||| ||| || || |||| ||| || || ||| | | ||| | |||||| Sbjct 8518 GGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTCCGAGGGCAAGGTCCGCTTC 8459 Query 9548 TCTCTGGTACCGTACGGCTGGTCTGCGGTAGCTGGTGCTTCCGTTAAGTTGCAGCTGGAA 9607 || | || || ||||||||| || | || || ||||| ||| | || |||||| Sbjct 8458 TCCATCGTCCCCTACGGCTGGAACCCGACCGTGGGCGCCTCCGTGAAGCTCCAACTGGAA 8399 Query 9608 GGCGTTATGTTGGTCGAACTGG 9629 ||| | ||| || | |||||| Sbjct 8398 GGCTTCATGCTGACCAAACTGG 8377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133026671993120