Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq379 136 1e-27 >seq379 Length=288837 Score = 136 bits (150), Expect = 1e-27 Identities = 366/551 (66%), Gaps = 18/551 (3%) Strand=Plus/Minus Query 4541 GCGGCGGCGACCATGC-GCATGGGCGGCGGCATCGGCTACGACTTCTCCACCCTGCGCCC 4599 || ||| |||||||| ||| ||||||||| |||||||| || ||||| ||| | ||||| Sbjct 227212 GCCGCGCTGACCATGCAGCA-GGGCGGCGGGATCGGCTATGATTTCTCGACCATCCGCCC 227154 Query 4600 CAAGGGCGACCTCATCGTCAAGCTGCAGTC-CCGCAG----CTCCGGCCCCATCTCCTTC 4654 | ||| | || ||| || ||| |||| | ||||||||| | |||| Sbjct 227153 ---GCGCGGGGCCGAGGTGAAGG-GC-GTCGCCGCCGATGCCTCCGGCCCGCTGAGCTTC 227099 Query 4655 ATGGAGATTTTCGACGCAGTCTGCCGCTGCACGTCCTCGTCCGGCCACCGGCGTGGCGCG 4714 ||||| | | || || | |||||| || || |||| || || |||||| Sbjct 227098 ATGGATGTCTGGGATGCGATGTGCCGCACCATCATGTCTGCCGGTTCGCGCCGGGGCGCG 227039 Query 4715 CAGATGGGCGTCCTGCGCATCGACCACCCCGACATCTTCGACTTCGTCCGCGCCAAGCAG 4774 ||||| | | ||||| ||||||||| || | | |||| || |||||| | Sbjct 227038 ATGATGGCCACCATGCGCTGCGACCACCCGGATGTGGAGGCCTTCATCGAGGCCAAGAAA 226979 Query 4775 AACGAGACCTTCCTGCGCGGCTTCAACATCTCCATCGCCGTCACGGACGAGTTCATGCGG 4834 || | || |||||| |||||| | || | ||||| || | |||||| Sbjct 226978 GACCCGGCCCGCCTGCGTATGTTCAACCTGTCGGTTCTGGTCACCGATGCCTTCATGGAT 226919 Query 4835 GCC---AAGCGCGACGGCAAGCCCTTCCAGCTGAAGTTCGGCGGCCGCGTCTACCGCGAG 4891 ||| ||| || ||| || | ||||| | |||| |||| ||||| | | | Sbjct 226918 GCCGTGAAGGCTGATGGC---CCGTGGGAGCTGCAATTCGACGGCAAGGTCTATCACACG 226862 Query 4892 GTGGACCCCAACGAGCTGTGGGACGCGGTCATGCGCTCCACCTGGGACTGGGCCGAGCCG 4951 || | | ||| |||||| || | |||||||| ||| | || | || || || Sbjct 226861 GTTCAGGCGCGCGATCTGTGGAACAAGATCATGCGCAACACTTATGATTTCGCGGAACCC 226802 Query 4952 GGCGTCCTGTTCATCGACCGCATCAACGAGATGAACAACCTCCACTACTGCGAGACCATC 5011 || || | |||||||||||||||||| |||||||||| || || || |||||| Sbjct 226801 GGTGTGATCTTCATCGACCGCATCAACAAGATGAACAATCTGGGTTATGTGGAAACCATC 226742 Query 5012 GCGGCGACCAACCCGTGCGGCGAGCAGCCGCTGCCACCGTTCGGCGCCTGCCTGCTCGGC 5071 || || |||||||| || || || ||||||||||| || | |||||||||||||| || Sbjct 226741 GCCGCCACCAACCCCTGTGGGGAACAGCCGCTGCCGCCCTATGGCGCCTGCCTGCTGGGG 226682 Query 5072 TCCTTCAACCT 5082 || |||| || Sbjct 226681 TCGGTCAATCT 226671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187115457324168