Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028822.1 Length=40829 Score E Sequences producing significant alignments: (Bits) Value seq34826 80.6 7e-11 >seq34826 Length=13225 Score = 80.6 bits (88), Expect = 7e-11 Identities = 126/178 (71%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 4478 CTTGCCTGTACCTCCCATGATAGCAATATCACCATCAACACGGCGGTCATA-TGCTGGCA 4536 ||| || || || ||||||| || || ||||| | || | |||||| || ||| || | Sbjct 5642 CTTCCCGGTGCCACCCATGAGGGCGATGTCACCGTTGACCCTGCGGTCGTACTGCGGG-A 5700 Query 4537 TCACATGCTTCATATCGAAGTCACGGAGGTCATTCACAGAGAACTGTTGTCCATTCGGTA 4596 ||| | || | |||||| |||||||||||||||| |||| | || || | || Sbjct 5701 CCACCCGAAGCAGGTTGAAGTCTCGGAGGTCATTCACAGCGAACGGCTGGCCGTCAGGCG 5760 Query 4597 GAGTGACTGGCATGTCAGAATCAAACAGGTTACGGGCTTCAAGGAATGAGTTGTTCTC 4654 |||| | ||| || || || || |||||||| ||||| ||| | ||||||||| Sbjct 5761 CGGTGATCGACATATCGGAGTCGAAGAGGTTACGAGCTTCGAGGTAGTCGTTGTTCTC 5818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130251823746312