Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028847.1 Length=170527 Score E Sequences producing significant alignments: (Bits) Value seq5 127 2e-24 >seq5 Length=869209 Score = 127 bits (140), Expect = 2e-24 Identities = 306/463 (66%), Gaps = 0/463 (0%) Strand=Plus/Minus Query 143867 GGACTAAACAACGTGATGTAATCATTTTTACCGAAACGTTCCATCATAAGGTCGTTCATC 143926 || || ||||| ||||| || |||| |||| | || | ||| ||| ||| | | Sbjct 711216 GGGCTGAACAAGGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAAC 711157 Query 143927 TGGATTCCGTAGTCCATATGGCGAATACGGTTCTCATCGACACCTTTGTTGTTTTTCAGA 143986 || | || ||||||| ||| | | |||||||| || ||||| ||| |||||||| Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 143987 ACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 144046 || ||||| ||| ||||||| |||||| | || || | || || || || ||| Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 144047 CGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATA 144106 || | || ||||| || || ||| || || ||||||||||| || | || || ||| Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 144107 ACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGAATCATACCA 144166 || ||||| | ||||||| | | || | |||| ||| ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 144167 ACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAGTTAGCAGTTTTG 144226 |||| ||||||||||| || || | || | ||||| | || | | | || Sbjct 710916 GCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCA 710857 Query 144227 TTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTGACGGGTT 144286 || || || | ||| ||| || ||||| | || || || || || ||||||||| Sbjct 710856 TTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTT 710797 Query 144287 GGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAACCT 144329 || ||||| | || | ||||||||| || || | ||||| || Sbjct 710796 GGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544329284202720