Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028881.1 Length=170473 Score E Sequences producing significant alignments: (Bits) Value seq5 163 3e-35 >seq5 Length=869209 Score = 163 bits (180), Expect = 3e-35 Identities = 344/511 (67%), Gaps = 3/511 (1%) Strand=Plus/Minus Query 142757 TCTTGGTCTTCAAAATAAGAATAATAAAGCTCACCGCTCATTTCATGAGGACTGAATAAC 142816 || || |||||||| | | || ||| ||| | | || ||| || || ||||| || Sbjct 711261 TCCTGATCTTCAAAGAAGGCATCATACAGCCC-CGGCACAT--CAGAGGGGCTGAACAAG 711205 Query 142817 GTGATGTAATCATTTTTACCGAAACGTTCCATCATAAGGTCGTTCAACTGGATTCCGTAG 142876 ||||| || |||| |||| | || | ||| ||| ||| ||||| | || ||| Sbjct 711204 GTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAACTGCACGCCATAG 711145 Query 142877 TCCATATGACGAATACGGTTCTCATCAACGCCTTTGTTGTTTTTCAGAACGAGCAGATTT 142936 |||| ||| | | |||||||| || || || ||| |||||||| || ||||| | Sbjct 711144 TCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGTACCAGCAGCGAT 711085 Query 142937 TCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCACCT 142996 || ||||||| |||||| | || || | || || || || ||||| | || ||| Sbjct 711084 TCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCACGCACACCGCCT 711025 Query 142997 TGTGAACATGATTTAACTGCAGTCTGGAAATGCTTCCAGAATGGAATAACACCGGTATGT 143056 || || || ||| ||||| |||||||||||||| | || || ||| || ||||| Sbjct 711024 TGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATACAGCCAGTATGA 710965 Query 143057 TTGACTTCACCCATACCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATACCA 143116 | |||| || ||| || | |||| ||| ||||| || |||| |||||| Sbjct 710964 AAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTTAATACCA 710905 Query 143117 ATACCTGCACGTTTAGAAATATACTCGATTATTGAGTTAGCAGTTTTATTAATTGATTTC 143176 |||||||| || | || | || | | || | | | || ||| || || | | Sbjct 710904 ATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCATTGATCGAATCC 710845 Query 143177 AGCGAGTCACCTGCTTCAATAACAACGCAAGAACTAAACTGACGGGTCGGGGTACGAGCA 143236 || |||||| ||||| | ||||| || || ||||||||||| |||||||| | Sbjct 710844 AGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACG 710785 Query 143237 CCAGCCATAATAGGAGTAGGCAATGAAATCT 143267 || | ||||||||| || |||| |||||||| Sbjct 710784 CCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544156873512480