Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028882.1 Length=84583 Score E Sequences producing significant alignments: (Bits) Value seq53614 333 1e-86 >seq53614 Length=7104 Score = 333 bits (368), Expect = 1e-86 Identities = 378/502 (75%), Gaps = 4/502 (1%) Strand=Plus/Plus Query 9564 TGGTGAGCGAGCAAGAGGGAGGTAATGATGTCAGCAATCATCAGCGAGTGCGGTAAATAT 9623 || |||||||||| |||||||| || |||||||||||||||||| || ||||| ||| Sbjct 5847 TGCTGAGCGAGCATGAGGGAGGGAACGATGTCAGCAATCATCAGTGAATGCGGCCGGTAT 5906 Query 9624 CGGTACCGCCTGGATCGAGACTGTTCGCCACCCTTTGAGGGTAGCAAGGTGTACGCCTAC 9683 || ||||| ||||| ||||| || | | || |||||||| ||||| |||| ||| || Sbjct 5907 CGTTACCGACTGGAGCGAGAATGCTGCCTGCCTTTTGAGGGCAGCAAAGTGTTCGCATAT 5966 Query 9684 TTCGGTGTTAACCCCAGCACGGCGGATGCCAGTACAGACGATGCTACCGTCCGAAAGTGG 9743 || || || ||||| |||||||||||||||| || |||||||| || || || |||||| Sbjct 5967 TTTGGGGTCAACCCAAGCACGGCGGATGCCAATATTGACGATGCGACGGTGCGCAAGTGG 6026 Query 9744 CGAGGCTTCACCGAGAGAAATGGAGGCCACAAGTTCATTGTAGGGAACGTCTTCTGCTAT 9803 ||||| ||||| | | |||||||| || ||||| || || |||||||||||||| Sbjct 6027 CGAGGGTTCACTCTGCGCAATGGAGGTCATCGATTCATCGTCGGCAACGTCTTCTGCTAC 6086 Query 9804 CGGGCCACCGACGTGAAAGAGCTGCGAAAAGTGGACGACCCGTTCGGACCTGAAAGCGTG 9863 || || || |||||||||||||| || | ||| || || |||||||| |||| Sbjct 6087 CGCGCTACTGACGTGAAAGAGCTTCGCGGACAGGATGATCCTTTCGGACCACTTAGCGCC 6146 Query 9864 GATTACTTCCAGTCCATCCTGGCCGAAGCTGACATCCTGGTGCCGTGCTGGGGGAGCCTG 9923 || |||||| |||| | || || || ||||| ||||| || |||||||| ||||| Sbjct 6147 GACCACTTCCGCGCCATAGTCGCTGATGCCGACATTCTGGTTCCTTGCTGGGGAAGCCTT 6206 Query 9924 TCAAAGCTGCC-CAAGCACCTTCGTGGGTGC-CCTCCTCAACTCCTCCAGTGGATGCTCC 9981 || || |||| | || | || ||| ||||| ||| |||| || || || ||| || ||| Sbjct 6207 TCGAAAATGCCGCGAG-ATCTGCGT-GGTGCTCCTGCTCAGCTTCTTCAATGGCTGATCC 6264 Query 9982 GCTCTAGTAAGCCCGTCATGTGCTTCGGGCTCACCCAATGTGACCAACCAAAACACCCCC 10041 | || | ||||| || ||||||||||| |||| || | || ||||| ||||| | Sbjct 6265 GATCAGGAAAGCCGGTAATGTGCTTCGGAATCACTGCCTGCGGACAGCCAAAGCACCCTC 6324 Query 10042 TTATGCTGGGGTACGACACTCC 10063 | ||||| || |||||||| || Sbjct 6325 TGATGCTTGGATACGACACACC 6346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 269946522977024