Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq57648 91.5 2e-13 seq457 84.2 2e-11 >seq57648 Length=6294 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 27092 TAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGAATCCTACAG 27151 |||||||||||||||||| | ||||||||||||| ||||||||| |||||| ||| || | Sbjct 244 TAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCGTGAGTTCGAGTCCCACTG 185 Query 27152 TCGGCACCAT 27161 ||||||||| Sbjct 184 CCGGCACCAT 175 >seq457 Length=273712 Score = 84.2 bits (92), Expect = 2e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 28374 GATAGCTCAGTTGGTAGAGCAGAGGGCTGAAAATCCTCGTGTCGTAGGTTCGATCCCTAC 28433 ||||||||||||||||||||| ||| ||||||||||| |||||| |||||||| ||| | Sbjct 147709 GATAGCTCAGTTGGTAGAGCAAAGGACTGAAAATCCTTGTGTCGCTGGTTCGATTCCTGC 147650 Query 28434 TCCGTCCAC 28442 || | |||| Sbjct 147649 TCAGGCCAC 147641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518656055309760