Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
seq363 208 2e-49
seq27787 143 8e-30
seq1 138 4e-28
seq7 91.5 5e-14
seq53823 82.4 2e-11
>seq363
Length=289854
Score = 208 bits (230), Expect = 2e-49
Identities = 542/812 (67%), Gaps = 46/812 (6%)
Strand=Plus/Plus
Query 37843 GGCGGCAGGACCCGAAGGCCCATGCGCCTGCACTCGCCGAGGTACGTGGCCATCTTGTTC 37902
|||||| ||| | ||||||||| | ||||| ||| | || | |||||||
Sbjct 187263 GGCGGCCGGATCTTCAGGCCCATGGCGCGACACTCCTCGATGAGGGTCACGATCTTGTCG 187322
Query 37903 TTGTCGTCGCCCACCGAGGTGAGCACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTC 37962
||| | | |||| | ||||| ||||||||| ||||||||||||| ||| |||
Sbjct 187323 GTGTTGGCCATTTCCGACGACAGCACCGCCGCCATGAACTCGGCCGGGTAATGCACCTTG 187382
Query 37963 AGGTACGCCGTGCGGTAGGCGATGAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCG 38022
|| | || || |||| | | || |||| || || ||||||| |||||||||| ||
Sbjct 187383 AGCCAGGCGGTCTGGTACGACACCAGCGCGTAGGCGGCCGAGTGCGACTTGTTGAAGCCG 187442
Query 38023 TACCCGGCGAAGGGTACGAGCACGTCCCACA--CCGCCCGGATGGCAGCCTCCGAGTAG- 38079
|| |||||||| | | | ||| | | ||||| | ||| |||| || |
Sbjct 187443 TAGCCGGCGAACTTCTCCATGAGGTCGAAGATGCCGCCGGCCTGG-----TCCGGGTCGA 187497
Query 38080 --CCTCGCTCGCTCGCCCCCTTCTGGAAGTTCACGAACTCCTTGGCCAGCACCTCGGGCT 38137
|| ||||||| || || | | ||| || ||| ||||||||||| |||||||||
Sbjct 187498 CGCCGCGCTCGCCCGAACCTTCCATGAACTTGACGCGCTCCTTGGCCATTTCCTCGGGCT 187557
Query 38138 TCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGA 38197
||||||||||||||||||| ||||| | |||||| || || | || |||||||| |
Sbjct 187558 TCTTCTTGCCCATGGCGCGGCGGAGCATGTCGGCGCCGCCCAGCGAATAGCCGGCCAGCA 187617
Query 38198 TCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGA 38257
||| || || | |||||| |||||||||| ||||| ||| |||| |
Sbjct 187618 CCTGGGCGATCTGCATCACCTGATCCTGGTAGAGGATGACACCGTAGGT---------GT 187668
Query 38258 TCTCGGCCAGCGGCTCCTCCACCTCGGG--GTGGATCGGCGTGATCTCCTGCTGACCGTT 38315
||| ||||| | ||||| |||||| | |||| ||| || | || | ||||
Sbjct 187669 TCT---CCAGCACCGGCTCCAGCTCGGGATGCGGATAGGCCACGTCGGC-GC-GGCCGTG 187723
Query 38316 CTTGCGGAGGGCGTAGTTCGT-GTGCGAGCCCATGCCCATCGGACCCGGACGGTACAGCG 38374
||||||| | | || |||| | | |||| ||| ||||||||| || |||||||
Sbjct 187724 CTTGCGGTTGATGAAG-TCGTCGACCATGCCCGACTCCAGCGGACCCGGGCGATACAGCG 187782
Query 38375 CGACGACGGCCGAGATGTCCTCGAACTGGTCCGGCTTCAGCAGGCGAAGCAGGGAGCGCA 38434
| || | ||| | ||||||||| | ||||| ||| | ||| |
Sbjct 187783 CCACCAGTGCCACCACGTCCTCGAAGCGCGAAGGCTTGAGCTTCTTGATCAG---CTCCT 187839
Query 38435 TCGCGCCGC-CG--TCGAGCTGGAAGACCGAGAGGGTGTCGCCCCTGGCCAGCAGCTCGT 38491
|| ||||| || ||||||||||| || | | ||| | |||| || || |||| ||
Sbjct 187840 TCATGCCGCGCGATTCGAGCTGGAACACGGCGGTGGTCTTGCCCTCGGACATGAGCTGGT 187899
Query 38492 AGGTTGCCGGGTCGTCCAGCGGGATGTTCTCGATGTCGA-CG--TGCTC-ACCACGGTTG 38547
||| |||||| | ||||||||| ||||||||||| || | || ||| || |
Sbjct 187900 AGGGACGCGGGTCATTGAGCGGGATGCGCTCGATGTCGATCGGCGGTTCGCCCAGGGCGG 187959
Query 38548 C------GGCG--GATGTTCTCGACCGCGTCGCCCATGATCGTGAGGTTCCGGAGCCCGA 38599
| |||| ||||| || | ||| | | ||||| || || | || || ||||
Sbjct 187960 CGCGCTTGGCGTTGATGTCCTTCAGCGCCCAGTCGATGATGGTCAGCGTGCGCAGGCCGA 188019
Query 38600 GGAAGTCCATCTTCAGCAGGCCCAGGGCCTCG 38631
||||||| | ||| | |||||||| |||||||
Sbjct 188020 GGAAGTCGAACTTGACCAGGCCCACGGCCTCG 188051
Score = 188 bits (208), Expect = 2e-43
Identities = 199/262 (76%), Gaps = 0/262 (0%)
Strand=Plus/Plus
Query 39081 GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGAT 39140
|||||||||||| | |||||||||||| || ||||| || || ||||| |||||||| |
Sbjct 188483 GAAGTCGATGTCGAAGTCGGGCATGGACACGCGCTCGGGATTGAGGAAGCGCTCGAACAG 188542
Query 39141 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39200
|| ||| ||| || |||||||||||||| || | ||| || ||||||||||
Sbjct 188543 CAGGTCGTACTTGATCGGATCCAGGTCGGTGATGAACAGCGAGTAAGCCACCAGCGAGCC 188602
Query 39201 AGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAA 39260
|| | || ||||| || || || ||| ||||||||| | ||| ||||||| ||||||
Sbjct 188603 GGCGCCGGAACCGCGACCCGGCCCCACCGGCACGCCGTTGTTCTTGGCCCAGCGGATGAA 188662
Query 39261 GTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATCATGTCGATCTCGTA 39320
||| ||||| |||||||| ||| || |||||||||||||| |||| || |||| |
Sbjct 188663 GTCCATGACGATCAGGAAGTAGCCCGGAAAACCCATCTGGTTGATGATGTTGAGCTCGAA 188722
Query 39321 CTCGACCTGCGTGCGGTGCTCG 39342
||| | ||| ||||| ||||
Sbjct 188723 CTCCAGGCGCGCGCGGTACTCG 188744
>seq27787
Length=17407
Score = 143 bits (158), Expect = 8e-30
Identities = 412/621 (66%), Gaps = 41/621 (7%)
Strand=Plus/Plus
Query 37933 GCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGTCCG 37992
|||||| || ||||||||||||| ||| || | || || |||||| || || ||
Sbjct 1 GCCATGAACGGCGCCGGGTAGTGCGCCTTGAGCCAGGCGGTCTGGTAGGAGACCAGGCCA 60
Query 37993 TACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCCCAC 38052
|| || || ||||||| |||||||||| |||| |||||||| | | | || ||| |
Sbjct 61 TAGGCTGCGGAGTGCGACTTGTTGAAGCCGTAGCCGGCGAACTTTTCTACCAGGTCAAAG 120
Query 38053 A-----CCGCCCGGATGGCAGCCTCCGAGTAGCCTCGCTCGCTCGCCCCCTTCTG-GAAG 38106
| ||| || | | | || || || | | | | || | || ||| ||||
Sbjct 121 ATGTTACCGGCCAGTT--CCGCGTCGATGTTG--TTGTTGGCACAACC--TTCGATGAAG 174
Query 38107 TTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGG 38166
|| || |||||||| | |||||||||||||||||||||||||||| || || | |
Sbjct 175 CCGCCGCGCTGCTTGGCCATCTCCTCGGGCTTCTTCTTGCCCATGGCGCGGCGCAGCATG 234
Query 38167 TCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGG 38226
|| |||||||| ||||| || || ||| || ||| || || | |||||| ||||||
Sbjct 235 TCCGCCTGACCCAGGGTATAGCCACCCATGACCTGGGCGATCTGCATCACCTGTTCCTGG 294
Query 38227 TAGATGATGAGCCCGAAGGTCGG-----GTCCAGGATCTCGGCCAGCGGCTCCTCCACCT 38281
|| | ||||| ||| ||||||| | | || || |||| ||| | || |
Sbjct 295 TACAGGATGATGCCGTAGGTCGGCTTGAGCACCGGCTCCAGGCCTGCG--TACTGGTAGT 352
Query 38282 CGGGGT--GGATCGGCGTGATCTCCTGCTGACCGTTCTTGCGGAGGGCGTAGTTCGTGTG 38339
|||||| || | | | | ||| | |||| ||||||| | | || ||||
Sbjct 353 CGGGGTGCGGGTAG--GACAGCTCGGCACGGCCGTGCTTGCGGTTGATGAAG-TCGT--- 406
Query 38340 CGAGCCCATGCC------CATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTC 38393
| | ||||||| || ||| ||||| ||| ||||||| || | || |||||
Sbjct 407 CCA--CCATGCCGGACTGCAGCGGCCCCGGGCGGAACAGCGCCACCAGTGCGATCATGTC 464
Query 38394 CTCGAACTGGTCCGGCTTCAGCAGGCGAAGCAGGGAGCGCATCGCGCCGC-CG--TCGAG 38450
|| | ||| ||||| ||| | ||| | || ||||| || |||||
Sbjct 465 TTCCAGGCAGTCGGGCTTGAGCTTCTTGATCAG---CTCCTTCATGCCGCGCGATTCGAG 521
Query 38451 CTGGAAGACCGAGAGGGTGTCGCCCCTGGCCAGCAGCTCGTAGGTTGCCGGGTCGTCCAG 38510
||||||||||| | ||| || || | ||||| ||||||||| | |||||||||
Sbjct 522 CTGGAAGACCGCGGTGGTCTCCGCCTTCTGCAGCATGTCGTAGGTTTTCTTGTCGTCCAG 581
Query 38511 CGGGATGTTCTCGATGTCGAC 38531
||||||| ||||||| |||
Sbjct 582 CGGGATGAAGTCGATGTTGAC 602
>seq1
Length=1655743
Score = 138 bits (152), Expect = 4e-28
Identities = 219/312 (70%), Gaps = 4/312 (1%)
Strand=Plus/Minus
Query 39009 GATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACG 39068
|||||| | |||||||| | ||| || || || || |||||||| || | ||
Sbjct 660895 GATCTGCCCCACCTTGTCGCGGCCATAGCGTTCCTGCACATAGCGGATCACCTCTTCGCG 660836
Query 39069 GCGACGGTCATC--GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGG 39126
|||| ||| |||||||||||| | ||||||||| || || || || |||||||||
Sbjct 660835 GCGATC--CATGCAGAAGTCGATGTCGAAGTCGGGCATCGACACCCGTTCCGGGTTCAGG 660778
Query 39127 AACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTAC 39186
|| || ||||| | ||| | | | | ||||| || |||||||| || || ||
Sbjct 660777 AAGCGTTCGAACAGCAGCGCATAGCGCAGCGGGTCAAGATCGGTGATGGTCAGCGCATAA 660718
Query 39187 GCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTC 39246
|| |||| ||||| || | || || ||||| || |||||| | | | | | ||||
Sbjct 660717 GCCACCAGAGAGCCTGCACCCGACCCCCGCCCCGGACCGACCGGGATGGCATGCGCCTTG 660658
Query 39247 GCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGTTGATC 39306
||||| |||||| ||||| |||| ||||||||| ||| ||| |||| | | |||
Sbjct 660657 GCCCATTTGATGAAATCGGCCACGATGAGGAAGTAGCCCGGAAACTTCATCCGCTCGATA 660598
Query 39307 ATGTCGATCTCG 39318
||||||| ||||
Sbjct 660597 ATGTCGAGCTCG 660586
Score = 82.4 bits (90), Expect = 2e-11
Identities = 95/127 (75%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 38115 CTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTG 38174
||| || |||| | |||||| | ||||||||||||||||| || || ||||||||
Sbjct 661798 CTCTTTTGCCATCTCCTCGGCGATTTTCTTGCCCATGGCGCGGCGCAGAAGGTCGGCGCC 661739
Query 38175 ACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGAT 38234
|||||| |||| || |||| || ||| || || | |||||| ||||| || | |||
Sbjct 661738 GCCGAGGCTGTAGCCCGCCATGACCTGTGCAATCTGCATCACCTGTTCCTGATAAACGAT 661679
Query 38235 GA-GCCC 38240
|| ||||
Sbjct 661678 GATGCCC 661672
>seq7
Length=747525
Score = 91.5 bits (100), Expect = 5e-14
Identities = 224/337 (66%), Gaps = 6/337 (2%)
Strand=Plus/Plus
Query 37926 CACGGCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGAT 37985
||| |||||||| |||||||||| || |||| ||||| || ||| |||||| ||
Sbjct 502323 CACCGCCGCCATAAACTCGGCCGGATAATGCGCCTTCATCCACAGCGTTTGGTAGGAGAC 502382
Query 37986 GAGTCCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCAC 38045
|| |||| || || ||||| | |||||| ||| | || |||||||| | | | ||
Sbjct 502383 CAGCGCGTAAGCGGCCGAGTGTGACTTGTTAAAGCCATAACCGGCGAATTTTTCTACCAA 502442
Query 38046 GTCCCACACCGCCCGGATGGCAGCCTCCGAGT-AGCCTCGCTCGCT--CGCCCCCTTCTG 38102
|| | | | || || || | || | || | | |||||| | |
Sbjct 502443 ATCGAAGATTTTC---ATCGCCAGTTCGGGGTCAATACCGTTTTGTACCGCCCCGTCGCG 502499
Query 38103 GAAGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAG 38162
|||| | || || |||||||| |||| ||||| ||||| ||||||||||| || |
Sbjct 502500 GAAGGTATCGCGCTGCTTGGCCATTTCCTCCGGCTTTTTCTTACCCATGGCGCGGCGTAA 502559
Query 38163 GAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTC 38222
| |||||| || || | || |||| || || ||| || || | ||||| ||
Sbjct 502560 TAAGTCGGCACCGCCAAGCGAATAGCCGGACAAGACCTGGGCGATCTGCATTACCTGTTC 502619
Query 38223 CTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATC 38259
||| || | ||| | ||| ||||||| |||||||||
Sbjct 502620 CTGATACAGGATAATACCGTAGGTCGGCTCCAGGATC 502656
>seq53823
Length=7075
Score = 82.4 bits (90), Expect = 2e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 38102 GGAAGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGA 38161
||||| || || | |||||||| | | ||| |||||||||||| ||||| || |
Sbjct 6971 GGAAGATCTCGCGGTGCTTGGCCATTTCGGCAGGCACCTTCTTGCCCATCGCGCGGCGCA 6912
Query 38162 GGAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCT 38221
| |||||||| || || | ||| ||| | | |||||||||| || | ||||||||
Sbjct 6911 GCAGGTCGGCGCCGCCCAGCGAGTAGCCGCCGACGATCTGCGCCATCTGCATCACCTGCT 6852
Query 38222 CCTGGTAGATGATGAGCCCGAAGGT 38246
||||||| | |||| ||| ||||
Sbjct 6851 CCTGGTACACCATGATGCCGTAGGT 6827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159373361158152
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