Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq5373 109 1e-19 >seq5373 Length=95907 Score = 109 bits (120), Expect = 1e-19 Identities = 295/444 (66%), Gaps = 8/444 (2%) Strand=Plus/Plus Query 5736 AGCTCACGGAATTTGGCATTGATGCCGTCAACGATGTCGCGAATCAGCGTTGCGGTG-AT 5794 || ||||||||||||||||| ||||| || |||||||| || | || |||| | Sbjct 44713 AGATCACGGAATTTGGCATTAATGCCCTCTACGATGTCTTTCGCCAAAGATG-GGTGCAA 44771 Query 5795 GGGCTTGTCCACCGCCCACATATGCGCCTCAGCCATCGTGTCGGCCAGCACCTGCGCGGT 5854 || || || || ||||||||||| | |||||||||||||| | || || || || || Sbjct 44772 AGGTTTATCAACTGCCCACATATGACCTTCAGCCATCGTGTCCGACAAAACTTGAGCTGT 44831 Query 5855 GCGGGTGTAGTTTTCAAAGAGGAACAGCGGGTCATCAGAGCAGGTACGGTTACCCCAGAA 5914 || || |||||||||| || | || ||| |||| || ||||| |||||| || Sbjct 44832 ACGAGTTGAGTTTTCAAATGCAAATAAAGGATCAGCAGAACAAGTACGTGAACCCCAAAA 44891 Query 5915 TCGGAAACCGTCGCGGCGAATCAGCGTAGTGACGCCTGACTCG--TTAAGCAGGTCAGCA 5972 ||||| || || || | || | || |||| | | | | || || ||||| Sbjct 44892 ACGGAAGCCATCACGCTGGATTAAAGTCGTGA--TTTCATTTGAATTGAGATAACCAGCA 44949 Query 5973 TCGGTGCCGGACTCCTGCAAATCCCAGAATACAGATGCGCTGATGCCGGTAACACCGTTT 6032 ||||| | ||||| | ||| || || | || || || || || ||| Sbjct 44950 TCGGTATCCATTGACTGCAGTTGCCAAAAAACGTCTTTAGAAATCCCTGTCACGCCATTT 45009 Query 6033 ACCCCGACGTTGGACAGCGTTTTATGCCAGCCCTGCTCCTGGTCGATTTTAGCGCGCAGA 6092 || ||||| || || ||||||||||| || || | ||| ||||| ||||| | | Sbjct 45010 ACTGGTACGTTTGAAAGGGTTTTATGCCATCCTGTGTCATTGTCAATTTTTGCGCGTAAA 45069 Query 6093 CCCAGCGCACGGGCGGTGGCATACGCGGTGGCGG-TGGTACTGTTGACCGTATCCCATGC 6151 || | || || ||||| || | || | || || | ||| | | ||||||||| | Sbjct 45070 CCTAATGCTCGAGCGGTTGCTTCAAAAGTAGTGGTTGATGATGTAG-CTGTATCCCATCC 45128 Query 6152 GAGGAAATCCGGCCAGATGACCAT 6175 | || || |||||||||| ||| Sbjct 45129 CAAAAAGTCTGGCCAGATGATCAT 45152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104214870231384