Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028906.1 Length=75933 Score E Sequences producing significant alignments: (Bits) Value seq4 369 2e-97 seq14 214 9e-51 seq7 134 7e-27 seq43338 86.0 3e-12 >seq4 Length=924746 Score = 369 bits (408), Expect = 2e-97 Identities = 635/917 (69%), Gaps = 15/917 (2%) Strand=Plus/Plus Query 66389 GCCCTGGCCGAGGTCGATAAACGCTTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAG 66448 || |||||| || |||| |||| |||||| || |||| ||| || || ||| || Sbjct 25877 GCGCTGGCCCAGATCGAGAAACAGTTCGGCAAGGGCTCGGTCATGCGCCTCGGCGACCAG 25936 Query 66449 CCACAGACCGTGGACGTC------ATTCCCACCGGCTCTATCGCTCTGGACGGCGCCCTG 66502 || | || | | | || ||| |||| ||||| | | |||||| ||||||| Sbjct 25937 CCTGACACGGGCGCCATCCCGGCCATTTCCACAGGCTCGCTGGGGCTGGACATCGCCCTG 25996 Query 66503 GGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGG 66562 |||||||| || || | |||||| | || || ||||||||||| || || || || Sbjct 25997 GGCATCGGCGGCCTGCCCAAGGGCCGCATCGTCGAGATCTACGGCCCCGAGTCCTCGGGC 26056 Query 66563 AAGTCAACTCTGTGTCTCCACGCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGC 66621 ||| | || ||| || || | | ||| ||| ||| |||||||||| ||||| Sbjct 26057 AAGACCACGCTGACCCTGCAGGTCATCGCCGCCTGC-CAGCGCGCCGGTGGCACGGCCGC 26115 Query 66622 CTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGC--GCTCGGTGTGGAC 66679 || | ||||||| ||||| | ||||| || |||||| ||| |||||| || | Sbjct 26116 CTTCGTCGACGCCGAGCATGCGCTGGATCCGCTCTACGCC--GGCAAGCTCGGCGTCAAT 26173 Query 66680 CTCGACAACCTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGAC 66739 |||| |||| ||||| ||||| || |||||||||||||| ||||| ||| ||| Sbjct 26174 GTCGAGGACCTGCTGGTGTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCACCGAC 26233 Query 66740 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTG 66799 | || || || |||| | | |||| |||| || |||||||| || || || | Sbjct 26234 ATGCTGGTGCGCTCGGGCGCGGTCGACATCATCGTTGTCGACTCCGTCGCCGCGCTCACG 26293 Query 66800 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 66859 ||||||||||| |||| || || || || |||| ||||||||||| || || |||||| Sbjct 26294 CCGCGCGCCGAAATCGAGGGTGAAATGGGCGACATGCACGTCGGCCTCCAGGCTCGCCTC 26353 Query 66860 ATGTCACAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTC 66919 ||||| ||||| |||||||| |||| |||| |||| | ||||| ||| || Sbjct 26354 ATGTCGCAGGCGCTGCGCAAGATCACCGGCAACATCAAGCGTTCCAACTGCCTGGTCATC 26413 Query 66920 TGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACC 66979 | |||||||| | ||| |||||||||| | || | | |||| || |||||| Sbjct 26414 TTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCG---GAAACCACC 26470 Query 66980 ACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCGCC 67039 || ||||| || || | | |||||||||||| || || | || |||| ||||||| | Sbjct 26471 ACCGGCGGCAACGCGCTCAAGTTCTACGCCTCGGTGCGCCTCGACATCCGACGCATCGGC 26530 Query 67040 ACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAAC 67099 | | ||||||||||| || | ||||| ||||| || ||||| ||||||||| Sbjct 26531 GCGGTCAAGGAAGGCGAAGAAGTGGTCGGTTCGGAAACCCGCGTCAAGGTGGTCAAGAAC 26590 Query 67100 AAGCTGGCCCCGCCGCACCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG 67159 ||| || | |||||| | | | ||||||||| || | ||||| |||||||| Sbjct 26591 AAGGTGTCGCCGCCGTTCAGGGAGGCCGAGTTCCAGATCCTCTACGGCCAGGGCATCAAC 26650 Query 67160 CGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCC 67219 || ||| ||| || ||||||||| |||| || || ||||| | ||||| |||||| Sbjct 26651 CGCCAGGGCGAGATCGTCGACCTGGGCGTGAAGCTCGGTCTGGTCGACAAGTCCGGCGCC 26710 Query 67220 TGGTTCAAGTACGGGGACAAGAACGTCGCCCAGGGCAAGCCCAAGGCCGTCCAGTGGCTC 67279 |||| | ||| || ||| || ||| ||||||||| ||| ||| | ||| || Sbjct 26711 TGGTACGCCTACCAGGGCAACAAGATCGGGCAGGGCAAGGGCAATGCCTGCAAGTTCCTG 26770 Query 67280 AAGGCCAACCCGGACAT 67296 || |||||||| || Sbjct 26771 CTGGAGAACCCGGATAT 26787 >seq14 Length=669857 Score = 214 bits (236), Expect = 9e-51 Identities = 456/678 (67%), Gaps = 15/678 (2%) Strand=Plus/Plus Query 66488 CTGGACGGCGCCCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66547 || ||| ||| ||||| ||||| || | |||| |||||| | || ||||||||||| Sbjct 599864 CTCGACATCGCGCTGGGGATCGGCGGATTGCCGAAGGGCCGCATCGTCGAAATCTACGGG 599923 Query 66548 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 66607 || ||| || || ||| | || ||| || || | ||||||| | | |||||| Sbjct 599924 CCGGAAAGCTCCGGTAAGACCACGCTGACGCTGCATGTGGTGGCCGAAGAGCAGAAAAAG 599983 Query 66608 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 66667 ||||| | ||||| | | || || || || | |||||||| || || | Sbjct 599984 GGTGGTGTCTGCGCCTTCGTAGATGCCGAACATGCGCTGGACCCGATCTATGCGCGTAAG 600043 Query 66668 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCTG 66727 || ||||| |||| || | || || | |||||||| || ||||| ||||| || Sbjct 600044 CTGGGTGTCAACCTTGATGAACTGCTGATCAGCCAGCCCGACACTGGCGAACAGGCGCTT 600103 Query 66728 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCCGTG 66787 || |||||||| || || || || | || | |||| || || ||||| || Sbjct 600104 GAAATCGTTGATACGCTGGTGCGTTCGGGTGCCGTGAGCCTCGTGGTGGTCGACTCGGTC 600163 Query 66788 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTG 66847 || || ||| ||| ||||| ||||||||||||| || ||| | |||||| Sbjct 600164 GCTGCGCTGACCCCGAAATCCGAGATCGAAGGCGACATGGGCGACGCTACTGTCGGCGCC 600223 Query 66848 CACGCGCGCCTCATGTCACAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAA- 66906 || || || || ||| ||||||||||||||||| || | | | ||| | || | || Sbjct 600224 CAGGCCCGACTGATGAGCCAGGCCATGCGCAAGCTGACGGCCTCGATCGGCCGCTCGAAT 600283 Query 66907 --CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG---GGCTAC 66961 || | | | ||| |||||||| | || |||||||||| || ||| || Sbjct 600284 TGCATGGTCA---TCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTTGGCAAC 600340 Query 66962 GGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGTATG 67021 |||||| |||||||| || || | || ||| ||||| ||| |||||| || Sbjct 600341 --CCCGAA----ACCACCACCGGTGGCCATGCGCTGAAATTCTATGCCAGCGTCCGTCTG 600394 Query 67022 GATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGG 67081 || | |||||||||| | || ||||| |||| |||| || |||||| ||||| Sbjct 600395 GACATTCGTCGCATCGGCTCCATCAAGGATCGCGACGAGGTGGTTGGCAACTCGACCCGC 600454 Query 67082 GTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCGAGTTCTCCGTCGTG 67141 ||||||||||| ||||||||| ||||||||||| | | | ||| ||| || || Sbjct 600455 GTGAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAACAGGTCGAATTCGATATCATG 600514 Query 67142 TACGGGGAGGGCATCTCG 67159 || || |||||||||||| Sbjct 600515 TATGGCGAGGGCATCTCG 600532 >seq7 Length=747525 Score = 134 bits (148), Expect = 7e-27 Identities = 329/496 (66%), Gaps = 7/496 (1%) Strand=Plus/Minus Query 66620 GCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGAC 66679 |||| ||||| || ||||| | |||| || | ||| || ||| | || ||||| Sbjct 602216 GCCTTTATCGATGCCGAGCATGCGTTGGATCCGGTGTATGCGAAGAAATTAGGCGTGGAT 602157 Query 66680 CTCGACAACCTCGTGGTGGTTCAGCCCGATACCGGCGAGCAGGCCCTGGAGATCGTTGAC 66739 |||| || || | || |||||| |||||||| |||||||| ||||||||| || Sbjct 602156 GTCGATAAGCTGTTAGTTTCTCAGCCAGATACCGGTGAGCAGGCGCTGGAGATCTGCGAT 602097 Query 66740 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCCGTGGCGGCCCTGGTG 66799 | | || |||| || | | | || | || ||||| || || || | | Sbjct 602096 ATGTTGGTACGCTCTGCCGCCGTAGACGTGGTGATTGTGGACTCGGTCGCTGCGTTAACG 602037 Query 66800 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 66859 || || || | ||||| ||||| || ||||| || | || | || || || | Sbjct 602036 CCAAAAGCAGAAATTGAAGGTGACATGGGTGACAGCCATATGGGTTTACAGGCCCGTTTA 601977 Query 66860 ATGTCACAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTC 66919 ||||||||||| |||| || || |||| | ||| || |||| || ||| || Sbjct 601976 ATGTCACAGGCACTGCGTAAACTGACTGCTAATATCAAACGCTCCAATACCCTGTGTATC 601917 Query 66920 TGGGTCAACCAGTTGCGCGAGAAGATCG--GCAACGTGGGCTACGGCCCGAATGAGACCA 66977 | |||||||| | || |||||||| | || || | || |||| || |||| Sbjct 601916 TTTATCAACCAGATCCGGATGAAGATCGGTGTAATGTTTGGTA--ACCCG---GAAACCA 601862 Query 66978 CCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCGTCGCATCG 67037 |||| ||||| || || ||| ||||| |||||||| ||| | ||| ||||||| || | Sbjct 601861 CCACTGGCGGTAATGCGCTGAAATTCTATGCCTCAGTACGTTTAGATATCCGTCGTATTG 601802 Query 67038 CCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGA 67097 | | | || ||||| ||||| | ||| ||| |||||||| ||||| || || | Sbjct 601801 GCTCGGTAAAAGAAGGTGATGAAATTACCGGTAACGAAACCCGGGTTAAGGTGGTAAAAA 601742 Query 67098 ACAAGCTGGCCCCGCC 67113 |||| |||| ||||| Sbjct 601741 ACAAAGTGGCTCCGCC 601726 >seq43338 Length=9689 Score = 86.0 bits (94), Expect = 3e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 66970 TGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGTATGGATGTCCG 67029 ||| || || || ||||| || || | | |||||||| ||||| ||||| ||| | || Sbjct 5571 TGAAACAACAACAGGCGGTAACGCACTTAAATTCTACGCTTCAGTACGTATCGATATTCG 5630 Query 67030 TCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGT 67089 ||| || | | | ||| ||||||||||||| ||| || ||| ||||| || || || Sbjct 5631 TCGTATTGGTTCAGTGAAAGAAGGCGATGAGGTTGTTGGTAACGAAACCCGCGTTAAAGT 5690 Query 67090 CGTCAAGAACAAGCTGGCCCCGCCG 67114 || || |||||| | || |||||| Sbjct 5691 TGTTAAAAACAAGGTTGCTCCGCCG 5715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242327325591624