Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq379 140 1e-28 >seq379 Length=288837 Score = 140 bits (154), Expect = 1e-28 Identities = 665/1035 (64%), Gaps = 80/1035 (8%) Strand=Plus/Minus Query 3974 AGGCAGCCGCG---ACCATGC-GCATGGGCGGCGGCATCGGCTACGACTTCTCCACCCTG 4029 ||| ||||||| ||||||| ||| ||||||||| |||||||| || ||||| ||| | Sbjct 227217 AGGAAGCCGCGCTGACCATGCAGCA-GGGCGGCGGGATCGGCTATGATTTCTCGACCATC 227159 Query 4030 CGCCC---CAAGGGCGACCTGATCGTCAAGCTGCAGTCCCGCAGC-TCCGGCCCCATCTC 4085 ||||| | || ||| ||| | | | || | ||| || |||||||| | Sbjct 227158 CGCCCGCGCGGGGCCGAGGTGAAGGGC--GTCGCCG--CCGATGCCTCCGGCCCGCTGAG 227103 Query 4086 CTTCATGGAGATTTTCGACGCGGTCTGCCGCTGCACGTCCTCGTCCGGCCACCGCCGTGG 4145 ||||||||| | | || ||| | |||||| || || |||| ||||| || Sbjct 227102 CTTCATGGATGTCTGGGATGCGATGTGCCGCACCATCATGTCTGCCGGTTCGCGCCGGGG 227043 Query 4146 CGCCCAGATGGGCGTCATGCGCATCGACCACCCCGACATCTTCGAGTTCATCCACGCCAA 4205 ||| ||||| | ||||||| ||||||||| || | | |||||| | ||||| Sbjct 227042 CGCGATGATGGCCACCATGCGCTGCGACCACCCGGATGTGGAGGCCTTCATCGAGGCCAA 226983 Query 4206 GCAGAACGAGCACTTCCTGCGCGGCTTCAATATCTCCATCGCCGTCACCGACGAGTTCAT 4265 | | || | | |||||| ||||| | || | |||||||| | ||||| Sbjct 226982 GAAAGACCCGGCCCGCCTGCGTATGTTCAACCTGTCGGTTCTGGTCACCGATGCCTTCAT 226923 Query 4266 GGAGTGCAAGCGGGACGGC--AAG--CCGTTCCAGCTGAAGTGGGGCGGGCGCGTCTACC 4321 ||| ||| || || ||| | | |||| ||||| | | | ||| ||||| | Sbjct 226922 GGA-TGC---CGTGAAGGCTGATGGCCCGTGGGAGCTGCAATTCGACGGCAAGGTCTATC 226867 Query 4322 GCGAGGTCGACCCCAACGAGCTGTGGGACGCTGTCATGCGCTCCACCTGGGACTGGGCCG 4381 | ||| | | ||| |||||| || |||||||| ||| | || | || | Sbjct 226866 ACACGGTTCAGGCGCGCGATCTGTGGAACAAGATCATGCGCAACACTTATGATTTCGCGG 226807 Query 4382 AGCCGGGCGTCCTGTTCATCGACACCATCAACCGCATGAACAATCTCTGGTACTGCGAGG 4441 | || || || | ||||||||| ||||||| ||||||||||| | || || Sbjct 226806 AACCCGGTGTGATCTTCATCGACCGCATCAACAAGATGAACAATCTGGGTTATGTGGAAA 226747 Query 4442 AGATTGCGGCCACCAACCCGTGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCTGCCTGC 4501 || || ||||||||||| || || || ||||||||||| || | ||||||||||||| Sbjct 226746 CCATCGCCGCCACCAACCCCTGTGGGGAACAGCCGCTGCCGCCCTATGGCGCCTGCCTGC 226687 Query 4502 TTGGCTCCTTCAACCTGGTGCGCTATCTGCGGCGCGACATGGTTGGCTGGTCCTT----- 4556 | || || |||| || |||| ||| ||| || | | |||| Sbjct 226686 TGGGGTCGGTCAATCT-----------TGCGACGC----TGG-TGACAGACCCTTTCACG 226643 Query 4557 -CGA--------CTGGTGCCAGCTCGCCGAGGACATCCCGGTCGTC------GTGCGCGC 4601 ||| || | || | |||| |||| | |||| | ||||| Sbjct 226642 CCGAAAGCAAAGCTTGATCC-GGTCGCGCTGGACGAACTGGTCCGCCTTTCGGTGCGGAT 226584 Query 4602 CATGGACAACGTGGTCGA--CCGGGCCCGCTACCCGTTGCCGCAGCAGGAGCAGGAGGCG 4659 |||||||| ||||| || || | ||||| |||| || ||||||| || |||||| Sbjct 226583 GATGGACAATGTGGTGGATGCCAG--CCGCTTCCCGCTGGAACAGCAGGCGCTTGAGGCG 226526 Query 4660 AGGTCCAAACGCCGGATGGGCCTGGGTGTGACCGCCCTGGCGAACGC--GGGCGAGGCCC 4717 | ||| ||||| || || ||||| ||||||| ||| ||| | || | || | | Sbjct 226525 CGCAACAAGCGCCGCATCGGGCTGGGCGTGACCGGCCTCGCGGATGCCTTGCTGATG--C 226468 Query 4718 TGGGCCACCCCTACGGC-TCGCC-CGGCTTCCTGGACTTCA-CCCGCCGCGT-GCTGA-- 4771 |||||| | ||| ||| | || ||| || | || ||| || | | ||| Sbjct 226467 TGGGCCTGCGCTATGGCAGCACCGAGGCCGCCGCG----CAGACCGAAGCCTGGATGAAG 226412 Query 4772 -CGATGGTGCGCGACGAGTCCTACCGCGCGTCGGCCCTGTTGGCCCATGAGAAGGGCTCC 4830 |||| | |||| | ||||||| ||| |||| | |||| | |||||||| | Sbjct 226411 GCGATCGCCCGCGCC---TCCTACCTCGCCTCGGTCGATCTGGCGAAAGAGAAGGGGCCT 226355 Query 4831 TTCCCGCTCTTCGAGGCCGAGCAGTACCTGGAGTCCGCCTTCGTGAAGACCCTGCCCGAG 4890 ||||| || ||||| |||||| ||||| | |||| | | ||| | || ||| Sbjct 226354 TTCCCTCTGTTCGATGCCGAGGGTTACCTCGCCTCCGGCAACATGATGCAGATGGATGAG 226295 Query 4891 GACGTCCGCGAGATGATCGCCGAGCTGGGCATCCGCAACTCCCACCTGACCTCCATCGCG 4950 || || ||||| |||| | || ||||| |||||| ||| ||||| ||||||||| Sbjct 226294 GATGTGCGCGACGCGATCCGCACGCATGGCATTCGCAACGCCCTGCTGACGTCCATCGCG 226235 Query 4951 CCGACCGGCACCATC 4965 || |||||||||||| Sbjct 226234 CCCACCGGCACCATC 226220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175846827332240