Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028954.1 Length=36065 Score E Sequences producing significant alignments: (Bits) Value seq14 141 2e-29 seq1 131 4e-26 seq140 91.5 3e-14 >seq14 Length=669857 Score = 141 bits (156), Expect = 2e-29 Identities = 244/351 (70%), Gaps = 10/351 (3%) Strand=Plus/Minus Query 21970 GACCCCGAGATTCGGACATTCCAGAACGGCGGCAAGGTGGCGAACCTGCGCATTGCCACC 22029 || |||||| | || | |||||||||||||||||||||| |||||||||||| |||||| Sbjct 425604 GATCCCGAGGTGCGCAGCTTCCAGAACGGCGGCAAGGTGGTGAACCTGCGCATCGCCACC 425545 Query 22030 ACCCGCCGGTGGAAGTCCAAGAACACGGGCGAGGTGCAGGAAGAAACCGAATGGCATTCG 22089 | ||| | |||| |||||||| ||||| ||||||||||||||| Sbjct 425544 TCGGAAACCTGGCGCGACCGGAACTCGGGCGAGCGCAAGGAACGCACCGAATGGCATTCG 425485 Query 22090 GTCGTTGTGACCAATGAGGCCCTTGTCAACAACGTGGAACGCTATCTGAAAAAAGGTTCC 22149 |||| | || ||| | || | ||| | || || | |||||| || || | Sbjct 425484 GTCGCCATTTTCAGCGAGCCGCTGGCCAAGATCGCCGAGCAATATCTGCGCAAGGGCAGC 425425 Query 22150 TATGTCCGAATTGAGGGGC-GCTTGCGGACCCGAAAATGGCAGGATCAGAACGGGACCGA 22208 | ||| || ||||| | ||||| ||||| |||||||||||||||| |||| || Sbjct 425424 AAGGTCTATATCGAGGGCCAGCTTGAA-ACCCGCAAATGGCAGGATCAGAGCGGGCAGGA 425366 Query 22209 TCGCTACACAACCGAAATCGTGGTGGCCCCCTACGGCGGCGAAATCGGCTTTCTGGATCG 22268 |||||| || |||||||||||| || |||||| | |||||| | | |||||| | Sbjct 425365 TCGCTATACGACCGAAATCGTGCTGCGCCCCTATCGTGGCGAACTGACGCTGCTGGATGG 425306 Query 22269 TCAGGGCGGCGGCGGNNNNNNNCGG-TCTGGTGGCAGTTCCGGCGGCGGCC 22318 | |||| ||||| ||| || |||||| ||| | |||| |||| Sbjct 425305 CCGTGGCGAGGGCGG-------CGGCTCGGGTGGCGGTTACAGCGGTGGCC 425262 >seq1 Length=1655743 Score = 131 bits (144), Expect = 4e-26 Identities = 232/333 (70%), Gaps = 14/333 (4%) Strand=Plus/Minus Query 10514 GGCGTGGGCGAACGGAACGGTTGCGTCCTTCCAAGGGGCCTATGATG---CAATCAAGGC 10570 ||| | ||||| || | || | ||| ||| || ||||||||||| | | || || Sbjct 152810 GGCTTCGGCGACCGCACCG-TGGCGATCTTTCAGGGGGCCTATGACGGGGCGGTC---GC 152755 Query 10571 CGTCTGGGGTATGTTGCCCGCCGCCCTTGGCGATCTGATCTATGCCTCCGCGAATTCGGT 10630 ||||||| | |||| | ||| | |||||| | |||| ||||||| | | Sbjct 152754 GATCTGGGGCAGCCTGCCGGGTGCCATCGGCGATTTCGCCTATCAAGCCGCGAACGGGTT 152695 Query 10631 TATCGGCGGGGTCGAGGCGATGATTAACGGGGTTGTGACCCGGATCAACGCTTTCATCAC 10690 ||||||||||||||||||||| | ||||| || || || || |||||||| |||||| Sbjct 152694 GATCGGCGGGGTCGAGGCGATGCTGAACGGCGTCGTCACGCGCATCAACGCCTTCATCGA 152635 Query 10691 CACGATGAATTCAGCCCTTGAAATGCTGCCCGAATGGGCCACCGGCGGCGAACCCGTGGA 10750 || ||||| | || || | | |||||||||||||||||||||||| | ||| Sbjct 152634 AACCCTGAATGCCGCGCTGGCACTGCTGCCCGAATGGGCCACCGGCGAAGGCGGCGTACG 152575 Query 10751 AATCGGGTTGGTCGGGGAGGTCAGTCTGGGCCGGATCGAAAACCCCTATGCGGGCGCGGC 10810 |||||| | ||| | ||| || || ||||||| ||||| | | ||||||||| Sbjct 152574 GATCGGGACGCTCGACGCCGTCGACTTGAGCAGGATCGACAACCCGTTCGAGGGCGCGGC 152515 Query 10811 TGAAC--AAGCGGG---CGCGGCGGCCGGTGCG 10838 ||| |||||| |||||| |||| |||| Sbjct 152514 --AACGGCAGCGGGCACCGCGGCAGCCGATGCG 152484 Score = 109 bits (120), Expect = 1e-19 Identities = 368/564 (65%), Gaps = 33/564 (6%) Strand=Plus/Minus Query 15288 CTATGCCGCCGACTGGTCCGAATAT------CATTCGCACCGCGACGGC--GGGC-AGGT 15338 ||| || |||||||||||||| ||| ||| || |||| ||| |||| | || Sbjct 146865 CTACGCGGCCGACTGGTCCGAGTATTTCGGCCATCAGCCGGGCGATGGCTCGGGCGACGT 146806 Query 15339 CTATTTCCACCTTGATCCGCTGTGGGCTTCGCCTTCGGTCGATTTCGTGGGGATTGATAA 15398 | ||||||||| |||||||| ||||| || | |||||||||| ||||| || || Sbjct 146805 GTTTTTCCACCTCGATCCGCTTTGGGCCGATCCCGAGATCGATTTCGTCGGGATCGACAA 146746 Query 15399 CTACCTGCCTTTGTCGGACTGGCGGCCCGGGGCCGATCATGCCGACTATGACCCCGAAAC 15458 |||| |||| | || |||||||| ||| ||| ||| |||| | ||||| Sbjct 146745 CTACATGCCGCTCTCCGACTGGCGCGACGGCTTCGAGCATCTCGACGCGG---CCGAA-- 146691 Query 15459 CGGCGTGACGTCGCCCTATT-GTCTG-GACTATCTGAAAGGCCAGATCGAGGGCGGCGAA 15516 ||| | | |||| | | | | | | ||| ||| | || | |||| |||||||||| Sbjct 146690 -GGCTGGCC--CGCCATCTACGACCGCGCCTACCTGCAGGGGAACATCGCGGGCGGCGAA 146634 Query 15517 TATTGGGATTATTACTATGCGTCCCAA----GCTGACCGCGACCGGCAGATTCGCACCCC 15572 | || | | ||| ||||| |||||||| | |||| | || ||||| Sbjct 146633 GGCTTCGACTGGTTCTAC----CCCAACGCGGCTGACCGATCCGCGCAGGTCCGGACCCC 146578 Query 15573 GATTTCCGATCTGGGCTATGGTGAACATTGGGTGTTCCGCCAGAAGGCAATCCGCGACTG 15632 || | || | | | | | ||||| ||||| | |||| | |||| ||| Sbjct 146577 CATCACGGACGGCGCCGCAAGCAAGCCGTGGGTCTTCCGTTACAAGGATCTGCGCGCCTG 146518 Query 15633 GTGGTCCAGCAATCACCACAACCGGCCCGGCGGGATCCGGGCGGGCGCGAAAACGTCC-- 15690 |||||| | | ||| ||||||| || |||||| | || | |||||| || | Sbjct 146517 GTGGTCGAACCCGCACTACAACCGCCCGGGCGGGGT---GGAGAGCGCGACGCCGACGGA 146461 Query 15691 -TGGACTCCGGGTTCCAAGCCGGTCTGGTTCACCGAATACGGTTGCCCGGCCGTCCATCT 15749 ||| | ||| || |||||| ||||||||||||| | || || || ||| || | | Sbjct 146460 GTGGGCGCCGCAGTCGAAGCCGATCTGGTTCACCGAGTTGGGCTGTCCCGCCATCGACCG 146401 Query 15750 TGGACCAAATCAGCCGAACGTGTTCTTTGACGCGCTTTCGTCGGAGGCCGCCTTGCCGCA 15809 || | || ||||||||||| ||||| || | ||||||||| | | |||||| Sbjct 146400 GGGCACGAACCAGCCGAACGTCTTCTTCGATCCAAAGTCGTCGGAGAGCTTCACGCCGCA 146341 Query 15810 TTATTCCAATGGTGCGCGGGACGA 15833 || ||| || ||||||||| Sbjct 146340 TTTCTCCCGCGGCTGGCGGGACGA 146317 Score = 89.7 bits (98), Expect = 1e-13 Identities = 163/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 17800 ATCTGGGGCTGCCG---ATCATTGCGGCATCGCAGGCACAAAAGCACGTCACCCACAACG 17856 ||||| |||||| ||| | ||||| |||||| || ||||| ||||||||||||| Sbjct 143753 ATCTGCTGCTGCCCTACATCCTCGCGGC---GCAGGCCCAGAAGCATGTCACCCACAACG 143697 Query 17857 AATCGCTGGTCCGTCTTGACGCGATGGTTCAGCTTGCGGTCCTGTCCGCCGCGATC--AC 17914 | ||||| || |||| | | || |||||| | || || | ||| || | || Sbjct 143696 AGGCGCTGCGGATCCTCGACGGGCTCGTCCAGCTTTCCGTTCT--CGACCGGGACCTGAC 143639 Query 17915 CGCCCCGCCCGCTTCCCCGTCCAATGGCGCGCGCTACATCGTGCCGACCGGCGCGACGGG 17974 ||| ||||| | ||| || || |||||| ||||||||||| | |||||||| || Sbjct 143638 CGCGCCGCCTGGTTCGCCCGCCGATGGCGACCGCTACATCGTCGGTTCGGGCGCGACCGG 143579 Query 17975 CGCGTGGGCGGGCAACG-CCGGAATGGTGGCGGTCTGGTCCGCTGGTGCTTGG 18026 || |||||||| | || ||| || ||| ||||| ||| ||| || ||| Sbjct 143578 CGACTGGGCGGGGTGGGACCTGAA-CGTTGCGATCTGGACCGATGGCGCCTGG 143527 >seq140 Length=372893 Score = 91.5 bits (100), Expect = 3e-14 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 18615 ACCGTGTCGGCGGCAACGGCGACGTTCGGCAATGCGACCACCGCCGCGACCTATGGCGTC 18674 ||||| ||||| || |||| | | || | || || || | || ||||| || ||| Sbjct 7078 ACCGTTTCGGCCGCGTCGGCCAGTATTGGGACGGCCACAACAACTGCCACCTACGGGGTC 7019 Query 18675 GGGTCGGGGGCCACGGTGTCGGGCGCGTCCAAGACGGTCAATATTGGCACCGGCGGCGCG 18734 || | || |||||| | | |||| |||||||||| ||||| || |||||||||||| Sbjct 7018 GGCACCGGAGCCACGACGACCGGCGTCACCAAGACGGTGAATATCGGGACCGGCGGCGCG 6959 Query 18735 TCCGGGTCCACGACAACGGTTAACATCGGC 18764 |||||||| ||||| || ||||||||| Sbjct 6958 TCCGGGTCGACGACGGTCGTGAACATCGGC 6929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115039652229864