Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028957.1 Length=171541 Score E Sequences producing significant alignments: (Bits) Value seq5 154 2e-32 >seq5 Length=869209 Score = 154 bits (170), Expect = 2e-32 Identities = 312/463 (67%), Gaps = 0/463 (0%) Strand=Plus/Minus Query 142788 GGACTAAACAGAGTGATGTAATCATTCTTAGCCAGACGTTCCATCATCAAGTTATTCAAC 142847 || || |||| ||||| || |||| ||| ||| || | ||||| | || ||| Sbjct 711216 GGGCTGAACAAGGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAAC 711157 Query 142848 TGGACGCCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAGA 142907 || ||||||||||||| ||| || | ||||| ||||| || || ||| || ||||| Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 142908 ACGAGCAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCAGCGCCGCCC 142967 || |||| ||| ||||||| |||||| || || || | || || || || || Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 142968 CGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAATA 143027 || | || ||||| || ||| ||| || || || |||||||| || | ||||| ||| Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 143028 ACACCAGTATGACGAACTTCACCCATACCGATTTTCGAACCTTCAGCACGAATCATACCA 143087 ||||||||| |||| || ||| |||| |||| ||| ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 143088 ACGTTGATGCCGATACCCGCACGCTTACTGATATATTCGATGATTGAATTGGCAGTCTTA 143147 |||| || || ||||| || |||| | |||| | || | | ||| || | Sbjct 710916 GCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCA 710857 Query 143148 TTGATTGACTTCAGGGAGTCTGCAGCTTCGATAACCACGCAGGAACTGAACTGCCGGGTA 143207 ||||| || | |||| ||| || || || | |||||||| |||||||| ||||| Sbjct 710856 TTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTT 710797 Query 143208 GGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAACCT 143250 || || | |||||| ||| |||||||| |||| |||| || Sbjct 710796 GGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547566773830560