Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028977.1 Length=41054 Score E Sequences producing significant alignments: (Bits) Value seq34826 125 2e-24 >seq34826 Length=13225 Score = 125 bits (138), Expect = 2e-24 Identities = 277/412 (67%), Gaps = 14/412 (3%) Strand=Plus/Minus Query 9364 TAGACCTCATCGTTAAGACCCATGAGGAAAACTACGCG--GCCCGT--CTGGAAGCGCAC 9419 |||||| |||||| || | ||| |||| |||||||| || ||| ||| || || Sbjct 8748 TAGACCGCATCGTGAAAATCCACGAGGCCGACTACGCGAAGCGCGTGACTG--AGTTCAA 8691 Query 9420 GAAGCGAACCCGCCGAAGGTTCAGAAGGGTAAGAAACCTCTGAAGCCGTACGAAGGCGAC 9479 |||| ||||| ||| || | | | | ||| || || ||||||| |||||||| Sbjct 8690 GAAG--AACCCTCCGCAGACGCCAAGTGCCAGGAAGCCACTCCAGCCGTATCAAGGCGAC 8633 Query 9480 ATGCCGTTCTTCGACAACGGTGACGGTACCACCACGTTCAACTTCAAGTGCTACGGTTCG 9539 |||| ||| |||||||||||||||| |||| | | |||||||| | ||| | | Sbjct 8632 CTGCCCTTCATCGACAACGGTGACGG------CACGGTGACCTTCAAGTTCGTCGGCTGG 8579 Query 9540 TACGAAGACAAGAAGACTGGCGAGACCAAGAAGATTGTTCTGGGTGTAGTTGACGCTAAG 9599 | || ||||| ||||||| | ||| ||| |||| |||||||| ||| Sbjct 8578 GCCAGCTACGAGAAGGACGGCGAGATGATCCCGATCCCCCTGCGTGTCGTTGACGCCAAG 8519 Query 9600 GGCAAACGCATCCAAGACGTTCCGATTATTGGTGGCGGTTCCAAAGTGAAGATTCGCTTC 9659 ||||| |||| || || |||| || || || ||| | | ||| | |||||| Sbjct 8518 GGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTCCGAGGGCAAGGTCCGCTTC 8459 Query 9660 TCGCTGGTACCGTATGGCTGGTCGGCGGTAGCTGGCGCTTCCGTTAAGTTGCAGCTGGAA 9719 || | || || || |||||| || | ||||| ||||| ||| | || |||||| Sbjct 8458 TCCATCGTCCCCTACGGCTGGAACCCGACCGTGGGCGCCTCCGTGAAGCTCCAACTGGAA 8399 Query 9720 GGCGTGATGCTGGTCGAACTGGCTGCCTTTGGTGGTGGCGAAGACGACTGGG 9771 ||| | |||||| | |||||| | | | || ||| |||||||||||| Sbjct 8398 GGCTTCATGCTGACCAAACTGGTCGAGTCAGATGATGGTCAAGACGACTGGG 8347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130970282728512