Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq152 104 5e-17 seq57648 102 2e-16 seq10625 100 6e-16 seq32994 98.7 2e-15 seq520 98.7 2e-15 seq26979 95.1 2e-14 >seq152 Length=367798 Score = 104 bits (114), Expect = 5e-17 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 294856 GAATATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCT 294915 ||| ||||||||| || | |||||||||| || |||||||||||||||||||||||||| Sbjct 249057 GAAAATGGTGCCGGCACACGGATTCGAACT-GTGGACCTACTGATTACAAGTCAGTTGCT 249115 Query 294916 CTACCAGCTGAGCTATAACGGCAA 294939 |||||| ||||||||| |||||| Sbjct 249116 CTACCAACTGAGCTATGCCGGCAA 249139 >seq57648 Length=6294 Score = 102 bits (112), Expect = 2e-16 Identities = 70/78 (90%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 294860 ATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTAC 294919 ||||||||| ||| |||| |||||| | ||||||||||||||||||||||||||||||| Sbjct 175 ATGGTGCCGGCAGTGGGACTCGAACTCA-CGACCTACTGATTACAAGTCAGTTGCTCTAC 233 Query 294920 CAGCTGAGCTATAACGGC 294937 || |||||||||| |||| Sbjct 234 CAACTGAGCTATACCGGC 251 >seq10625 Length=57339 Score = 100 bits (110), Expect = 6e-16 Identities = 71/80 (89%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 294860 ATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTAC 294919 ||||||||| || | |||||||||| || |||||||||||||||||||||||||||||| Sbjct 5825 ATGGTGCCGGCACACGGATTCGAACT-GTGGACCTACTGATTACAAGTCAGTTGCTCTAC 5767 Query 294920 CAGCTGAGCTATAACGGCAA 294939 || ||||||||| |||||| Sbjct 5766 CAACTGAGCTATGCCGGCAA 5747 >seq32994 Length=14149 Score = 98.7 bits (108), Expect = 2e-15 Identities = 71/81 (88%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 294857 AATATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTC 294916 || ||||||||| || | |||||||||| || ||||||||||||||||||||||||||| Sbjct 16 AAGATGGTGCCGGCACACGGATTCGAACT-GTGGACCTACTGATTACAAGTCAGTTGCTC 74 Query 294917 TACCAGCTGAGCTATAACGGC 294937 ||||| ||||||||| |||| Sbjct 75 TACCAACTGAGCTATGCCGGC 95 >seq520 Length=264922 Score = 98.7 bits (108), Expect = 2e-15 Identities = 71/81 (88%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 294857 AATATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTC 294916 || ||||||||| || | |||||||||| || ||||||||||||||||||||||||||| Sbjct 94713 AAGATGGTGCCGGCACACGGATTCGAACT-GTGGACCTACTGATTACAAGTCAGTTGCTC 94655 Query 294917 TACCAGCTGAGCTATAACGGC 294937 ||||| ||||||||| |||| Sbjct 94654 TACCAACTGAGCTATGCCGGC 94634 >seq26979 Length=17813 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 294864 TGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTACCAGC 294923 ||||| || ||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1 TGCCGGCACCAGGAGTCGAACCCGG-GACCTACTGATTACAAGTCAGTTGCTCTACCAGC 59 Query 294924 TGAGCTATAACGGC 294937 ||||||||| |||| Sbjct 60 TGAGCTATACCGGC 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987049756040108