Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029003.2 Length=29733 Score E Sequences producing significant alignments: (Bits) Value seq5373 122 2e-23 >seq5373 Length=95907 Score = 122 bits (134), Expect = 2e-23 Identities = 215/301 (71%), Gaps = 13/301 (4%) Strand=Plus/Minus Query 4710 TCGGT-CGAAACGGCGACTATGAGAACCTCGACGCGCTGGTGATGGATGCGACCAATAAC 4768 ||||| ||| | ||||| ||| | || |||| || |||| |||||| |||||| | Sbjct 55805 TCGGTGCGACA-GGCGATTATCATAATGTCGATGCATTGGTAATGGATTTAACCAATGAA 55747 Query 4769 CTGATTGACGAGGTTTATCAGGATGACCCGAAACTCGTTG--CCATCGT--TGGCCGTAA 4824 ||||||| ||||| | ||||| | || | | |||| | || || | | |||| Sbjct 55746 ATGATTGATGAGGTACACCAGGACAATCCTGATTTGGTTGTACTAT-GTAATCGTCGTA- 55689 Query 4825 GCTGCTGGCCGACAAATATTTCCCGCTGGTGAACAAGCCGCAGGAAAACAGCGAGGCGCT 4884 ||| | | |||||||||||||| ||||| ||||| ||| || |||||||| || Sbjct 55688 -CTGTTT-CTGACAAATATTTCCCACTGGTAAACAAAGAGCAAGAGAACAGCGAAAAACT 55631 Query 4885 CGCGGCAGATATCATCATCAGCCAGAAGCGAATCGGCAACCTGCCTG-CTGTGCGTGTGC 4943 | |||||||| || |||||||| || || || ||||| | |||| || ||| ||||| Sbjct 55630 TTCTGCAGATATTATTATCAGCCAAAAACGCATGGGCAATTTACCTGTCTATGC-TGTGC 55572 Query 4944 CGTACTTCCCGGCGAATGCCGTGTTAGTGACCACGCTGGAAAACCTCTCTATCTAT-TTC 5002 ||| |||||| | ||||| | || ||||| || | || ||||| || |||||| ||| Sbjct 55571 CGTTCTTCCCAGAAAATGCAATCTTGGTGACAACATTTGACAACCTTTCAATCTATGTTC 55512 Query 5003 A 5003 | Sbjct 55511 A 55511 Score = 111 bits (122), Expect = 3e-20 Identities = 303/454 (67%), Gaps = 15/454 (3%) Strand=Plus/Minus Query 14696 GACGGTTTCCGCTTCTGGGGTAACCGCACCTGCTCAGATGACCCGCTTTTTCTGTTTGAG 14755 || || ||||| || |||||| || || || || | ||| || | ||| ||||| Sbjct 44903 GATGGCTTCCGTTTTTGGGGTTCACGTACTTGTTCTGCTGATCCTTTATTTGCATTTGAA 44844 Query 14756 AACTACACCCGTACCGCGCAGGTACTGGCCGACACGATGGCTGAAGCGCACATGTGGGCG 14815 |||| || ||||| || || || || | |||||||||||||||| || |||||||| Sbjct 44843 AACTCAACTCGTACAGCTCAAGTTTTGTCGGACACGATGGCTGAAGGTCATATGTGGGCA 44784 Query 14816 GTCGATAAGCCCATTACCGCCACGCTCATTCG----TGACATTGTTGACGGCATCAATGC 14871 || ||||| || || | ||| || || | ||||| || || ||||| ||||| Sbjct 44783 GTTGATAA-ACCTTTGCACCCA---TCTTTGGCGAAAGACATCGTAGAGGGCATTAATGC 44728 Query 14872 CAAATTCCGCGAGCTGAAAACAAACGGCTACATCGTGGACGGTGAATGCTGGTTCGA-CG 14930 ||||||||| || || || | || |||||| | || ||| | || |||||||| | Sbjct 44727 CAAATTCCGTGATCTTCGTACCCAAGGGTACATCATCGATGGTCAGTGTTGGTTCGATCC 44668 Query 14931 AGGAATCGAACGACAAGGAGACCCTGAAAGCCGGGAAACTGTATATCGACTACGACTATA 14990 || | || ||| ||| ||| | | ||||| || | | | || || |||| || Sbjct 44667 AGCATTC-AACAGCAAAGAGTCATTAAAAGCTGGTCGTTTATTGCTTGATTATGACTTTA 44609 Query 14991 CGCCGGTTCCGCCAC-TGGAGAGCATGACCATGCGCCAGCGTATCACCGATAAATATCTG 15049 | || || || |||| || ||| | | ||| | | || |||||||| || |||||| Sbjct 44608 CCCCTGTGCCCCCACTTGAAGATC-TCACCTTACAGCAACGTATCACAGACCGATATCTC 44550 Query 15050 GTGAATCTGGCCGAATCGGTCAACAGCTAAG--GAGCCTGAAACAACATGGCACTACCCC 15107 | || | ||| | || || ||| || | |||| |||||||| |||| Sbjct 44549 GCTGATTTCGCCTCA-CGTATGACTGCTTAGATATACAGGAAAGAACATGGCTTTACCTA 44491 Query 15108 GTAAACTCAAATACCTGAATATGTTCAACGATGG 15141 |||||||||| || || |||| ||||| || Sbjct 44490 AGAAACTCAAATTAATGGATCTGTTTAACGAAGG 44457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94820619895240