Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029042.1 Length=156833 Score E Sequences producing significant alignments: (Bits) Value seq5 109 5e-19 seq51 95.1 1e-14 >seq5 Length=869209 Score = 109 bits (120), Expect = 5e-19 Identities = 287/429 (67%), Gaps = 13/429 (3%) Strand=Plus/Plus Query 102612 CTTCCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTA 102671 || || |||||||||||||| ||||| || ||||| ||||| ||||||||||| || ||| Sbjct 710762 CTGCCGACACCTATTATGTCGGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTA 710821 Query 102672 TTGA-TCAAACTGGTGACACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGAT 102730 ||| | | |||||||| |||| || || |||||||| | | ||| || | Sbjct 710822 CTGATTGAGTGTGGTGACAGCCTGGATTCGATCAATGCCACCTCCAGTGCCATTGTAAAA 710881 Query 102731 TATGTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATTGGTAGC 102790 || || || | || || || || || | | | || ||||| | | |||||| Sbjct 710882 TACGTGTCGCAGCGCGCAGGTATTGGTATTAACGCAGGCCGTATTCGCGCTTTAGGTAGC 710941 Query 102791 CCTATCCGTAAAGGGGAAATGGTCCATACAGGTCTGGTTCC--ATTCATCAAGTATTT-- 102846 || |||||||| || ||| | ||||| || ||| ||| || || ||| |||| Sbjct 710942 CCAATCCGTAATGGCGAAGCCTTTCATACTGG-CTGTATCCCGTTTTAT-AAGCATTTCC 710999 Query 102847 -GACTGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGG-ATCGGCAACATGC 102904 ||| || | || ||||| ||||||||| | |||||||| || || | || Sbjct 711000 AGAC---CGCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCCTGT 711056 Query 102905 TATGTTCCCATCTGGCATTATCAATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGA 102964 | | ||| | |||||| || | || | | || || ||||| ||||| || Sbjct 711057 TCT-ACCCCTTGTGGCATCTGGAAGTGGAATCGCTGCTGGTACTGAAAAATAACCGCGGT 711115 Query 102965 TTGGAAGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAACCGCGTTATGTTC 103024 | ||||||||||| | | | | | | |||||||| | ||| |||||||| | |||| Sbjct 711116 GTAGAAGAGAACCGGGTAAGGCATCTGGACTATGGCGTGCAGTTTAACCGCCTGATGTAT 711175 Query 103025 GAGCGCCTG 103033 |||||||| Sbjct 711176 CAGCGCCTG 711184 >seq51 Length=473680 Score = 95.1 bits (104), Expect = 1e-14 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 19443 TGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC 19502 ||||| ||| |||||||| |||||||||||| |||||||||||||||| |||||||||| Sbjct 469304 TGGTGGCCCCAGCTGGACTCGAACCAGCGACCGATCGATTATGAGTCGAGTGCTCTAACC 469245 Query 19503 -ACTGAGCTACGGG 19515 ||||||||| ||| Sbjct 469244 AACTGAGCTATGGG 469231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500607210274080