Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029073.1 Length=141298 Score E Sequences producing significant alignments: (Bits) Value seq1973 113 4e-20 >seq1973 Length=162522 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 36761 GGATTAATGCAATTGATGCCGGGAACAGCTAGAAGTTTAGGTGTGACTAATGCATATGAC 36820 || ||||||||| | ||||| | ||| ||| || |||| ||| | ||||||||||||| Sbjct 9205 GGTTTAATGCAACTCATGCCAGCAACGGCTCGACGTTTTAATGTAAGTAATGCATATGAC 9264 Query 36821 CCATATCAAAATATCATGGGTGGTACAAAATATCTCGCTCAACAATTAAAACGATTTGGC 36880 || | ||||| || | ||| ||||||| || | | || | ||||| Sbjct 9265 CCTCAACAAAACATATATGCTGGCGCAAAATACCTGAGTTGGTTACTACGAAGATTTAAT 9324 Query 36881 GGAAGTATTGAAAAAGCACTTGCCGCATATAATGCAGGCCCCGGTAATGTAATAAAATAT 36940 |||| || | || |||||||| || |||||||| || |||||||| |||||| Sbjct 9325 GGAAATACTCAACTTGCACTTGCAGCCTATAATGCTGGTGAAGGTAATGTTGATAAATAT 9384 Query 36941 GGCGGTATTCCACCATTTAAAGAAACGCAAAATTATGTAAGAAGAGTAAC 36990 || || ||||| ||||||| |||||| ||| ||||||| | ||||||| Sbjct 9385 GGTGGAATTCCTCCATTTAGAGAAACTCAAGATTATGTCCGTCGAGTAAC 9434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451007208924480