Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029079.1 Length=75339 Score E Sequences producing significant alignments: (Bits) Value seq4 379 1e-100 seq14 208 4e-49 >seq4 Length=924746 Score = 379 bits (420), Expect = 1e-100 Identities = 635/916 (69%), Gaps = 13/916 (1%) Strand=Plus/Plus Query 66012 GCCCTGGCCGAGGTCGATAAACGCTTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAG 66071 || |||||| || |||| |||| |||||| || |||| ||| || || ||| || Sbjct 25877 GCGCTGGCCCAGATCGAGAAACAGTTCGGCAAGGGCTCGGTCATGCGCCTCGGCGACCAG 25936 Query 66072 CCACAGACTGTGGACGTC------ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTG 66125 || | || | | | || ||| |||| ||||| | | |||||| ||| ||| Sbjct 25937 CCTGACACGGGCGCCATCCCGGCCATTTCCACAGGCTCGCTGGGGCTGGACATCGCCCTG 25996 Query 66126 GGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGG 66185 |||||||| || || | |||||| | || || ||||||||||| || || || || Sbjct 25997 GGCATCGGCGGCCTGCCCAAGGGCCGCATCGTCGAGATCTACGGCCCCGAGTCCTCGGGC 26056 Query 66186 AAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCTGCC 66245 ||| | || ||| || || | | ||| |||| |||||||||| || ||| Sbjct 26057 AAGACCACGCTGACCCTGCAGGTCATCGCCGCCTGCCAGCGCGCCGGTGGCACGGCCGCC 26116 Query 66246 TACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGC--GCTCGGTGTGGACC 66303 | | ||||||| ||||| | ||||| || |||||| ||| |||||| || | Sbjct 26117 TTCGTCGACGCCGAGCATGCGCTGGATCCGCTCTACGCC--GGCAAGCTCGGCGTCAATG 26174 Query 66304 TCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACC 66363 |||| |||| ||||| ||||||||||| ||||||||||| ||||| ||| ||| Sbjct 26175 TCGAGGACCTGCTGGTGTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCACCGACA 26234 Query 66364 TCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGC 66423 | || || || |||| | | |||| |||| || ||||| || || || || || Sbjct 26235 TGCTGGTGCGCTCGGGCGCGGTCGACATCATCGTTGTCGACTCCGTCGCCGCGCTCACGC 26294 Query 66424 CGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCA 66483 |||||||||| |||| || || || || |||| ||||||||||| || || ||||||| Sbjct 26295 CGCGCGCCGAAATCGAGGGTGAAATGGGCGACATGCACGTCGGCCTCCAGGCTCGCCTCA 26354 Query 66484 TGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCT 66543 |||||||||| |||||||| ||||||||| |||| | ||||| ||| ||| Sbjct 26355 TGTCGCAGGCGCTGCGCAAGATCACCGGCAACATCAAGCGTTCCAACTGCCTGGTCATCT 26414 Query 66544 GGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCA 66603 |||||||| | ||| |||||||||| | || | | |||| || ||||||| Sbjct 26415 TCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCG---GAAACCACCA 26471 Query 66604 CGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCA 66663 | |||||||| || | | |||||||||||| || ||| | || |||| ||||||| | Sbjct 26472 CCGGCGGCAACGCGCTCAAGTTCTACGCCTCGGTGCGCCTCGACATCCGACGCATCGGCG 26531 Query 66664 CCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACA 66723 | | ||||||||||| || | ||||| ||||| || ||||| |||||||||| Sbjct 26532 CGGTCAAGGAAGGCGAAGAAGTGGTCGGTTCGGAAACCCGCGTCAAGGTGGTCAAGAACA 26591 Query 66724 AGCTGGCCCCGCCGCACCGCAATGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGC 66783 || || | |||||| | | | ||||||||| || | ||||| |||||||| | Sbjct 26592 AGGTGTCGCCGCCGTTCAGGGAGGCCGAGTTCCAGATCCTCTACGGCCAGGGCATCAACC 26651 Query 66784 GTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCT 66843 | ||| ||| || ||||||||| |||| || || ||||| | ||||| ||||||| Sbjct 26652 GCCAGGGCGAGATCGTCGACCTGGGCGTGAAGCTCGGTCTGGTCGACAAGTCCGGCGCCT 26711 Query 66844 GGTTCAAGTACGGGGACAAGAACGTCGCCCAGGGCAAGCCCAAGGCCGTCCAGTGGCTCA 66903 ||| | ||| || ||| || ||| ||||||||| ||| ||| | ||| || Sbjct 26712 GGTACGCCTACCAGGGCAACAAGATCGGGCAGGGCAAGGGCAATGCCTGCAAGTTCCTGC 26771 Query 66904 AGGCCAACCCGGACAT 66919 || |||||||| || Sbjct 26772 TGGAGAACCCGGATAT 26787 >seq14 Length=669857 Score = 208 bits (230), Expect = 4e-49 Identities = 455/678 (67%), Gaps = 15/678 (2%) Strand=Plus/Plus Query 66111 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66170 || ||| ||| ||||| ||||| || | |||| |||||| | || ||||||||||| Sbjct 599864 CTCGACATCGCGCTGGGGATCGGCGGATTGCCGAAGGGCCGCATCGTCGAAATCTACGGG 599923 Query 66171 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCCCAGAAGGCC 66230 || ||| || || ||| | || ||| || || | ||||||| | | ||||| Sbjct 599924 CCGGAAAGCTCCGGTAAGACCACGCTGACGCTGCATGTGGTGGCCGAAGAGCAGAAAAAG 599983 Query 66231 GGTGGCAACGCTGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 66290 ||||| | |||| | | || || || || | |||||||| || || | Sbjct 599984 GGTGGTGTCTGCGCCTTCGTAGATGCCGAACATGCGCTGGACCCGATCTATGCGCGTAAG 600043 Query 66291 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 66350 || ||||| |||| || | || || | ||||| ||||||||||| ||||| || Sbjct 600044 CTGGGTGTCAACCTTGATGAACTGCTGATCAGCCAGCCCGACACTGGCGAACAGGCGCTT 600103 Query 66351 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 66410 || |||||||| || || || || | || | |||| || || ||||| || Sbjct 600104 GAAATCGTTGATACGCTGGTGCGTTCGGGTGCCGTGAGCCTCGTGGTGGTCGACTCGGTC 600163 Query 66411 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTG 66470 || || ||| ||| ||||| ||||||||||||| || ||| | |||||| Sbjct 600164 GCTGCGCTGACCCCGAAATCCGAGATCGAAGGCGACATGGGCGACGCTACTGTCGGCGCC 600223 Query 66471 CACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA- 66529 || || || || ||| ||||||||||||||||| || | | | ||| | || | || Sbjct 600224 CAGGCCCGACTGATGAGCCAGGCCATGCGCAAGCTGACGGCCTCGATCGGCCGCTCGAAT 600283 Query 66530 --CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG---GGCTAC 66584 || | | | ||| |||||||| | || |||||||||| || ||| || Sbjct 600284 TGCATGGTCA---TCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTTGGCAAC 600340 Query 66585 GGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATG 66644 |||||| |||||||| || ||| | || ||| ||||| ||| ||||| || Sbjct 600341 --CCCGAA----ACCACCACCGGTGGCCATGCGCTGAAATTCTATGCCAGCGTCCGTCTG 600394 Query 66645 GATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGG 66704 || | |||||||||| | || ||||| |||| |||| || |||||| ||||| Sbjct 600395 GACATTCGTCGCATCGGCTCCATCAAGGATCGCGACGAGGTGGTTGGCAACTCGACCCGC 600454 Query 66705 GTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAATGCCGAGTTCTCCGTCGTG 66764 ||||||||||| ||||||||| ||||||||||| | | | ||| ||| || || Sbjct 600455 GTGAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAACAGGTCGAATTCGATATCATG 600514 Query 66765 TACGGGGAGGGCATCTCG 66782 || || |||||||||||| Sbjct 600515 TATGGCGAGGGCATCTCG 600532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240430700938800