Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029091.1 Length=168771 Score E Sequences producing significant alignments: (Bits) Value seq5 105 7e-18 >seq5 Length=869209 Score = 105 bits (116), Expect = 7e-18 Identities = 290/441 (66%), Gaps = 9/441 (2%) Strand=Plus/Plus Query 42113 CATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTCTCAA 42172 ||||| || ||| || || | || |||||||| || ||||||||| || || ||| Sbjct 710966 CATACTGGCTGTATCCCGTTTTATAAGCATTTCCAGACCGCAGTAAAAAGCTGCTCGCAA 711025 Query 42173 GGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGTAGAG 42232 || ||| | ||||||||||| || || || || || ||||||| | ||||| || Sbjct 711026 GGCGGTGTGCGTGGTGGTGCCGCCACCCTGTTCTACCCCTTGTGGCATCTGGAAGTGGAA 711085 Query 42233 AACCTATTAGTTCTGAAAAATAACAAAGGCGTGGATGAAAACCGTATTCGACATATGGAC 42292 || | || |||||||||||| || || || || ||||| | | ||| ||||| Sbjct 711086 TCGCTGCTGGTACTGAAAAATAACCGCGGTGTAGAAGAGAACCGGGTAAGGCATCTGGAC 711145 Query 42293 TACGGAATTCAGATTAATGACCTTATGATGGAACGCCTTGGTAAAAATGATTATATTACT 42352 || || | ||| |||| ||| ||| | ||||| |||| |||| ||||| || Sbjct 711146 TATGGCGTGCAGTTTAACCGCCTGATGTATCAGCGCCTGATTAAAGATGACTATATCACC 711205 Query 42353 TTATTTAGCCCTCACGAAATGTCAGGCGAACTATACTACTCGTTCTTTGAAGATCAAGAT 42412 || || ||||| || || | || || || | | |||||||||||||| || Sbjct 711206 TTGTTCAGCCCCTCTGATGTGCCGGG---GCTGTATGATGCCTTCTTTGAAGATCAGGAA 711262 Query 42413 AAATTCCGTG-AGC--TTTATGAGAAAGCTGAAAAAGACCCAACAATCAGAAAGAAAAGA 42469 || || || ||| | |||| ||| |||| ||| | ||| | || || | Sbjct 711263 AAGTT---TGAAGCCTTATATGTGAAGTATGAAGCTGACAGCAAGATCCGTAAAAAGCGC 711319 Query 42470 ATCAAAGCACTAGAACTCTTTGAATTGTTCATGACTGAACGTTCTGGCACCGCTCGAATT 42529 || || ||| | ||||||||| || || ||| || || | | |||| || ||| Sbjct 711320 ATTAAGGCAGTCGAACTCTTTACCTTATTTATGCAGGAGCGCGCCAGTACCGGCCGCATT 711379 Query 42530 TATCCGCAATTCGTTGATAAC 42550 || | |||| ||| ||| || Sbjct 711380 TACCTGCAAAACGTCGATCAC 711400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538722743979360