Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029093.1 Length=75796 Score E Sequences producing significant alignments: (Bits) Value seq4 383 8e-102 seq14 217 7e-52 >seq4 Length=924746 Score = 383 bits (424), Expect = 8e-102 Identities = 638/917 (70%), Gaps = 15/917 (2%) Strand=Plus/Plus Query 65676 GCCCTGGCCGAGGTCGATAAACGCTTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAG 65735 || |||||| || |||| |||| |||||| || |||| ||| || || ||| || Sbjct 25877 GCGCTGGCCCAGATCGAGAAACAGTTCGGCAAGGGCTCGGTCATGCGCCTCGGCGACCAG 25936 Query 65736 CCACAGACTGTGGACGTC------ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTG 65789 || | || | | | || ||| |||| ||||| | | |||||| ||| ||| Sbjct 25937 CCTGACACGGGCGCCATCCCGGCCATTTCCACAGGCTCGCTGGGGCTGGACATCGCCCTG 25996 Query 65790 GGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGG 65849 |||||||| || || | |||||| | || || ||||||||||| || || || || Sbjct 25997 GGCATCGGCGGCCTGCCCAAGGGCCGCATCGTCGAGATCTACGGCCCCGAGTCCTCGGGC 26056 Query 65850 AAGTCAACTCTGTGTCTCCACGCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGC 65908 ||| | || ||| || || | | ||| ||| ||| |||||||||| ||||| Sbjct 26057 AAGACCACGCTGACCCTGCAGGTCATCGCCGCCTGC-CAGCGCGCCGGTGGCACGGCCGC 26115 Query 65909 CTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGC--GCTCGGTGTGGAC 65966 || | ||||||| ||||| | ||||| || |||||| ||| |||||| || | Sbjct 26116 CTTCGTCGACGCCGAGCATGCGCTGGATCCGCTCTACGCC--GGCAAGCTCGGCGTCAAT 26173 Query 65967 CTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGAC 66026 |||| |||| ||||| ||||||||||| ||||||||||| ||||| ||| ||| Sbjct 26174 GTCGAGGACCTGCTGGTGTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCACCGAC 26233 Query 66027 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTG 66086 | || || || |||| | | |||| |||| || ||||| || || || || | Sbjct 26234 ATGCTGGTGCGCTCGGGCGCGGTCGACATCATCGTTGTCGACTCCGTCGCCGCGCTCACG 26293 Query 66087 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 66146 ||||||||||| |||| || || || || |||| ||||||||||| || || |||||| Sbjct 26294 CCGCGCGCCGAAATCGAGGGTGAAATGGGCGACATGCACGTCGGCCTCCAGGCTCGCCTC 26353 Query 66147 ATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTC 66206 ||||||||||| |||||||| ||||||||| |||| | ||||| ||| || Sbjct 26354 ATGTCGCAGGCGCTGCGCAAGATCACCGGCAACATCAAGCGTTCCAACTGCCTGGTCATC 26413 Query 66207 TGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACC 66266 | |||||||| | ||| |||||||||| | || | | |||| || |||||| Sbjct 26414 TTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCG---GAAACCACC 26470 Query 66267 ACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCC 66326 || |||||||| || | | |||||||||||| || ||| | || |||| ||||||| | Sbjct 26471 ACCGGCGGCAACGCGCTCAAGTTCTACGCCTCGGTGCGCCTCGACATCCGACGCATCGGC 26530 Query 66327 ACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAAC 66386 | | ||||||||||| || | ||||| ||||| || ||||| ||||||||| Sbjct 26531 GCGGTCAAGGAAGGCGAAGAAGTGGTCGGTTCGGAAACCCGCGTCAAGGTGGTCAAGAAC 26590 Query 66387 AAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG 66446 ||| || | |||||| | | | ||||||||| || | ||||| |||||||| Sbjct 26591 AAGGTGTCGCCGCCGTTCAGGGAGGCCGAGTTCCAGATCCTCTACGGCCAGGGCATCAAC 26650 Query 66447 CGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCC 66506 || ||| ||| || ||||||||| |||| || || ||||| | ||||| |||||| Sbjct 26651 CGCCAGGGCGAGATCGTCGACCTGGGCGTGAAGCTCGGTCTGGTCGACAAGTCCGGCGCC 26710 Query 66507 TGGTTCAAGTACGGGGACAAGAACGTCGCCCAGGGCAAGCCCAAGGCCGTCCAGTGGCTC 66566 |||| | ||| || ||| || ||| ||||||||| ||| ||| | ||| || Sbjct 26711 TGGTACGCCTACCAGGGCAACAAGATCGGGCAGGGCAAGGGCAATGCCTGCAAGTTCCTG 26770 Query 66567 AAGGCCAACCCGGACAT 66583 || |||||||| || Sbjct 26771 CTGGAGAACCCGGATAT 26787 >seq14 Length=669857 Score = 217 bits (240), Expect = 7e-52 Identities = 457/678 (67%), Gaps = 15/678 (2%) Strand=Plus/Plus Query 65775 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 65834 || ||| ||| ||||| ||||| || | |||| |||||| | || ||||||||||| Sbjct 599864 CTCGACATCGCGCTGGGGATCGGCGGATTGCCGAAGGGCCGCATCGTCGAAATCTACGGG 599923 Query 65835 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 65894 || ||| || || ||| | || ||| || || | ||||||| | | |||||| Sbjct 599924 CCGGAAAGCTCCGGTAAGACCACGCTGACGCTGCATGTGGTGGCCGAAGAGCAGAAAAAG 599983 Query 65895 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 65954 ||||| | ||||| | | || || || || | |||||||| || || | Sbjct 599984 GGTGGTGTCTGCGCCTTCGTAGATGCCGAACATGCGCTGGACCCGATCTATGCGCGTAAG 600043 Query 65955 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 66014 || ||||| |||| || | || || | ||||| ||||||||||| ||||| || Sbjct 600044 CTGGGTGTCAACCTTGATGAACTGCTGATCAGCCAGCCCGACACTGGCGAACAGGCGCTT 600103 Query 66015 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 66074 || |||||||| || || || || | || | |||| || || ||||| || Sbjct 600104 GAAATCGTTGATACGCTGGTGCGTTCGGGTGCCGTGAGCCTCGTGGTGGTCGACTCGGTC 600163 Query 66075 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTG 66134 || || ||| ||| ||||| ||||||||||||| || ||| | |||||| Sbjct 600164 GCTGCGCTGACCCCGAAATCCGAGATCGAAGGCGACATGGGCGACGCTACTGTCGGCGCC 600223 Query 66135 CACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAA- 66193 || || || || ||| ||||||||||||||||| || | | | ||| | || | || Sbjct 600224 CAGGCCCGACTGATGAGCCAGGCCATGCGCAAGCTGACGGCCTCGATCGGCCGCTCGAAT 600283 Query 66194 --CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG---GGCTAC 66248 || | | | ||| |||||||| | || |||||||||| || ||| || Sbjct 600284 TGCATGGTCA---TCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTTGGCAAC 600340 Query 66249 GGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATG 66308 |||||| |||||||| || ||| | || ||| ||||| ||| ||||| || Sbjct 600341 --CCCGAA----ACCACCACCGGTGGCCATGCGCTGAAATTCTATGCCAGCGTCCGTCTG 600394 Query 66309 GATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGG 66368 || | |||||||||| | || ||||| |||| |||| || |||||| ||||| Sbjct 600395 GACATTCGTCGCATCGGCTCCATCAAGGATCGCGACGAGGTGGTTGGCAACTCGACCCGC 600454 Query 66369 GTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTG 66428 ||||||||||| ||||||||| ||||||||||| | | | ||| ||| || || Sbjct 600455 GTGAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAACAGGTCGAATTCGATATCATG 600514 Query 66429 TACGGGGAGGGCATCTCG 66446 || || |||||||||||| Sbjct 600515 TATGGCGAGGGCATCTCG 600532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241889888592572