Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq11470 136 3e-27 >seq11470 Length=53368 Score = 136 bits (150), Expect = 3e-27 Identities = 303/446 (68%), Gaps = 9/446 (2%) Strand=Plus/Plus Query 125924 TTATACCGCAATAGGTGCTTTAATAGCAGGGTGTGATTCATAATTTATCAATTCTAAATC 125983 ||| || || | |||||||||||| || || |||||||| || || | ||| | || Sbjct 34098 TTAAACTGCTACAGGTGCTTTAATTGCTGGATGTGATTCGTATCCTACGATTTCGATGTC 34157 Query 125984 TTCATAATTAATATCAAAAATTGATTT---ATCTGTATTAATTTTTAATTGAGGTGGTAG 126040 |||| | |||| |||||||| ||| ||| | ||| | ||||| ||| | | Sbjct 34158 TTCAAACTTAAAGTCAAAAATATCTTTGACATCAGGATTGAGCTTTAACTGACATAACGG 34217 Query 126041 ATAACTATCTCTTGA-TAA-TTGTG-TATGTATTGCATCCATATGATTGGAATAAATATG 126097 |||| | || || ||| |||| | || |||| || | || || | ||| | || Sbjct 34218 -TAACGGT-TCACGAGTAAGTTGTAATTTGGCTTGC-TCAAAGTGGTTTGCATATAAGTG 34274 Query 126098 TGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAG 126157 || ||| ||| || || || || || || || | ||||| ||| ||||| | Sbjct 34275 TGTATCACCACCAGTCCAAACAAAGTCCCCAACATCTAAACCACAGACTTGTGCAATCAT 34334 Query 126158 ATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACT 126217 ||| || |||| ||||| || |||||||| || || ||||||||||||| ||| ||||| Sbjct 34335 ATGGGTGAGTAGGGCATAGCTAGCAATATTAAATGGCACACCTAAAAATACATCTGCACT 34394 Query 126218 TCTTTGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTG 126277 | |||||| | ||| ||| | ||| || || || ||||||| |||| || || Sbjct 34395 ACGTTGATAAAGTTGGCAAGAGAGTTTGTTATCATGCACAAAAAATTGGAACAGGGTATG 34454 Query 126278 GCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACG 126337 ||||||||||| || | | | |||| | |||||||| | ||||| || || Sbjct 34455 ACAAGGTGGTAAAGCAACCTTACCTGCTTCATTTGGATTCCAGCCCGAAACGATTAAGCG 34514 Query 126338 TCGAGAGTTTGGATTGGTTTTAATTT 126363 || || || ||||||||||| |||| Sbjct 34515 ACGTGAATTCGGATTGGTTTTGATTT 34540 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/199 (70%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 126614 TGCCCATTCATTCCATATATTG---TTATTATATTTAAGTAGGTATTGAATGTTTGTATC 126670 ||||||||||| ||| ||| || ||||| | ||| || ||||||| ||| ||||| Sbjct 34689 TGCCCATTCATCCCAAATAGTGACTTTATTGTCTTT---GAGATATTGAACGTTAGTATC 34745 Query 126671 TCCTTTAATAAACCATAATAATTCAGTTGCTACTAATTTAAAAGAAACCTTTTTGGTTGT 126730 ||||| | ||||| | | ||| || | | | | ||| ||| || || || || Sbjct 34746 ACCTTTGAGGAACCAAAGAAGCTCAATTACAATTGAACGAAAGTGAACTTTCTTAGTGGT 34805 Query 126731 AAGTAAAGGAAACCCTTTGGTTAAATCGAAACGCAATTGATGCCCAAATTTGGAAATTGT 126790 ||||| ||||| ||||| | | ||| ||||||| |||||| |||||| ||| ||| Sbjct 34806 TAGTAATGGAAAACCTTTAGAAAGATCAAAACGCATTTGATGACCAAATACCGAACGTGT 34865 Query 126791 CCCGGTATGTGTGCGATCA 126809 || ||| ||| || ||| Sbjct 34866 ACCTGTACCTGTACGGTCA 34884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407700862028852