Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq1499 95.1 1e-14 >seq1499 Length=182485 Score = 95.1 bits (104), Expect = 1e-14 Identities = 193/283 (68%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 47987 TCCATGTCGTATGCTTCTTTAAAGAAGAACCAGTTTTGAGGAGACAGACCCGGCATTGGG 48046 ||||| |||||||| ||| ||| |||| |||| | | | || | ||||||||| Sbjct 106547 TCCATATCGTATGCCGATTTGAAGTAGAAGTAGTTATCATTCGTCAAATAAGGCATTGGG 106606 Query 48047 TAGTAAGTCTTACTGTTTCCGTATGTTCTTTCTTCAATCTTCTCCATGATTGGCATAACC 48106 |||||||| |||| | ||| || ||| | || || | |||| |||||||||||| Sbjct 106607 TAGTAAGTGGTACTATCTCCATACTCTCTCACCTCGATGATGTCCACGATTGGCATAACA 106666 Query 48107 GAAGCTGTTGCCGAT--TGAACATAAGAGATTGATCCAGTAGGAGCAATACATAAACGGT 48164 ||||| || | || | || | ||||| | ||| | |||||||| ||||||| Sbjct 106667 GAAGCCGTCG-CGTTCATG-ATGTAAGAAGTAGATTGGTTCGGAGCAATGGCCAAACGGT 106724 Query 48165 AGCTATGATACATACCGTGCTTCTTAACTTTTTCTTTAAGGTTTGCCCAATCAGCTCTAG 48224 | ||| || |||||||| | | || | | |||| ||||||| |||||| || | Sbjct 106725 AAGCATGGTAGATACCGTGTTCCGCCACCTGTGCTTTTAGGTTTGTCCAATCTTCTACGG 106784 Query 48225 TCGGTAGCTTCATGCCTTCGAAAAGCTGCTTAACTTTGTCTGT 48267 | || | | |||||| |||| | | ||| || ||||| || Sbjct 106785 TTGGAATATGGATGCCTGCGAACAATTCCTTCACCTTGTCGGT 106827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483315056601120