Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq6372 98.7 9e-16 >seq6372 Length=86001 Score = 98.7 bits (108), Expect = 9e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||| || || | ||| ||| ||||| ||||| || || |||||||| ||||| || | Sbjct 39289 GACCTGCGCCACCATCAGCGTCAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACGCCGAG 39348 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||| |||| || || ||||||||||||||||||| || | ||||||||||| Sbjct 39349 GAAGATGTCCGCCGAGCGCTGGTAGAGCTGGCAGGACAGCTTGCCGTCGGCGACGTAGAA 39408 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATC 6769 ||| | || | || || || || ||||||||| Sbjct 39409 CTGGAACAGCGCATGACAGGGCGGCAGCGCCATC 39442 Score = 98.7 bits (108), Expect = 9e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635 ||||||||| || || || || | || | ||| ||||||||||| | || ||||||| Sbjct 39442 GATGGCGCTGCCGCCCTGTCATGCGCTGTTCCAGTTCTACGTCGCCGACGGCAAGCTGTC 39383 Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || |||| ||||| | || ||||| |||||||| || || Sbjct 39382 CTGCCAGCTCTACCAGCGCTCGGCGGACATCTTCCTCGGCGTGCCCTTCAACATCGCCAG 39323 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 ||||| ||||| ||| ||| | || || ||| Sbjct 39322 CTACGCCCTGCTGACGCTGATGGTGGCGCAGGTC 39289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447252487225920