Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq18050 313 2e-80 seq38288 277 2e-69 seq4663 228 7e-55 seq5663 161 8e-35 seq77092 143 2e-29 seq76486 123 2e-23 >seq18050 Length=32055 Score = 313 bits (346), Expect = 2e-80 Identities = 612/893 (69%), Gaps = 26/893 (3%) Strand=Plus/Plus Query 4255 ATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATAT 4314 |||| |||||||| || || |||| || |||| ||||| ||||| || |||| Sbjct 11574 ATTTCTGGTATTCCCCGACACGTTTTTAAAAACAATTGGTTTTTCCTTCCAAACTAATAC 11633 Query 4315 TTTCCATAAAA-TCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCT-AC 4372 ||||| |||| ||||| || || | | ||| ||| |||||| | | || Sbjct 11634 ATTCCAAAAAAATCAAAAGGGTTTTCCACAATATAAATTTTATCACACCCCAATTCCCAC 11693 Query 4373 AAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAAT 4432 || |||||||| || |||||||| ||||| || | || | | || || || ||||| Sbjct 11694 AAT-AATCGGTCTGCCACAAATTCAATATATTGCTTTATCAATGTACAATTCATGCCAAT 11752 Query 4433 TAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492 | || |||| || | || ||||| ||||| || || |||||||| | | || Sbjct 11753 GAGGGATACTGGTAATGCCTCGGTTAAAAATTCTTGCTCAATCGTTACGGCATACGATAT 11812 Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCA---AACAATAAACA 4549 || | |||| || ||||||| ||| ||| || ||| | ||||| ||| Sbjct 11813 AATTTGCACAATTTAATGCTTAGATGATTTGTTTTTTACGTAATGATTGAACAAGTGACA 11872 Query 4550 CGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCC 4609 | |||||| || || | ||||| |||| ||||||| ||||| ||||||||||| Sbjct 11873 GGAAAAATCGCAGTGTAGCCCTTCATCTCGACTAATCAACTCGTTGCTAAACGTTAATCA 11932 Query 4610 GGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATAT 4669 |||||||| || | || || | |||||| || || ||||| || || || || | || Sbjct 11933 AGGCATTAATCCCCGTTTCTTTAACCAAAAAATGGCCGCAAAGGAACCTGAGAAAAGGAT 11992 Query 4670 GCCTTCTACGGCGGCAAACGCTACTAATCG----GGACCCGAACGAGCTGGCTTTGTCTT 4725 ||||| || |||||||| || || | || ||| || || | || ||||| Sbjct 11993 TCCTTCCACAGCGGCAAAGGCCACCAGCCGTTTTGGA----AAAGA-CGGGTTTTGT--- 12044 Query 4726 TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785 ||||| ||||||| ||| | || |||||||||||||| | || || | || |||| Sbjct 12045 --ATCCAATTTAATGACCATTCTGCCTTTTTCTTAACGCAGGAAAGGGTTTCAATGGCGT 12102 Query 4786 TAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACA 4845 |||| ||| || ||||||| | ||| ||| || || || | | ||| |||| Sbjct 12103 TAAACAATGTATTTTTTTCTTGATGATCTCGAACGAGGGTCTCAATCAACAAGCTGTACA 12162 Query 4846 TTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA 4905 |||| ||||| |||||||| || ||||||||||| | |||||||| | ||| || | | Sbjct 12163 TTTCTGAATGAATATTTTCAATGGCAATCTGAAAGTCATAAAAGCAACGAGCCTCGATCA 12222 Query 4906 CTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965 ||| ||||| | ||| | ||| ||||| ||||| ||||| ||||| |||||||| | Sbjct 12223 CTTTTACTTCACGAGCAAAGCGTTCCACTAAATTTTCATTTACAATACCTTCACTGGCGG 12282 Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGT 5025 | ||||| |||||||||||||| | ||| | |||| || || | | | ||||||| | Sbjct 12283 C-AAAAAGGCCAAAACATGAGAAAGAAAACGCCGTTCATCGGGGGTTAATCTTTTCCAAT 12341 Query 5026 GGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTT 5085 | |||||| | |||| |||||| | | ||||||| || || | || |||| Sbjct 12342 ATCTTACATCTTTGGACAAATTCACTTCTGCCA---TCCAAAAGGAAGCAACGGCCTTTT 12398 Query 5086 TGTACATAGA-CCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGTT 5137 |||||| ||| ||| | ||| | |||| |||| | ||||||||| ||| Sbjct 12399 TGTACA-AGAGCCACAAATCCAAGTGTTGAAGGGGAAATGTGACAAATCGGTT 12450 >seq38288 Length=11396 Score = 277 bits (306), Expect = 2e-69 Identities = 423/597 (71%), Gaps = 12/597 (2%) Strand=Plus/Plus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 ||||| ||| |||||||| || || | ||||| |||| || |||| | ||| | Sbjct 7662 AACAAGTGACAGGCAAAATCCCAGTGTAGTCCTTCATCTCGACTCATCAACTTGTTGCTA 7721 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 ||||||||||| |||||||| | | || || | |||||| ||||| | ||| || || Sbjct 7722 AACGTTAATCCAGGCATTAATTCCCGTTTCTTTAACCAAAAAATAGCCGAAAAGGAACCT 7781 Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCT 4718 || || || || ||||| || |||||||| || || || || | || || ||| | Sbjct 7782 GAGAAAAAGATTCCTTCCACAGCGGCAAAGGCCACCAACCGTTTTGCAAAAGA--TGGAT 7839 Query 4719 TTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTAT 4778 || | ||||| ||||||||||| | || |||||||||| ||| | || || | Sbjct 7840 TT----TGTATCCAATTTAATGCCCATTCTGCCTTTTTCTTAAAGCAGGAAAGGGTTTCA 7895 Query 4779 ATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838 || |||||||| |||||| ||||||| | ||| ||| | || || || | | Sbjct 7896 ATGGCGTTAAACAATTTATTTTTTTCTTGATGATCTCAAATGAGGATCTCAATCAGCAAG 7955 Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCT 4898 || |||||||| |||||||||||||| || ||||||||||| || |||||||| | | || Sbjct 7956 CTGTACATTTCTGAATGTATATTTTCAATGGCAATCTGAAAGCCATAAAAGCAACGAACT 8015 Query 4899 TCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCA 4958 || || |||| |||||| | || | ||| ||||| ||||| |||| ||||| ||| Sbjct 8016 TCGGTCACTTTGACTTCGCGAGCGAAGCGTTCCACTAAATTTTCAATTACAATACCATCA 8075 Query 4959 CTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTT 5018 ||||| |||||||| |||| |||||| || | ||| | | || || || | | | || Sbjct 8076 CTGGCGGCAAAAAAGGCCAGAACATGGGAAAGAAAATGCCATTTATCGGGGGTTAATCTT 8135 Query 5019 TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCC 5078 | ||| | | |||||| | ||||| |||||||| | ||||| || || || | Sbjct 8136 TCCCAATCTCCCCCATCTTTGGACAAATCCACTTCTTCTGCCGTCCAGAAGGAAGCGACA 8195 Query 5079 GCTTTTTTGTACATAGA-CCAAATATC--AGGATACTGAATCGGAAGTATGACAAAT 5132 || |||||||||| ||| ||| | ||| || || ||| |||| | |||||||| Sbjct 8196 GCCTTTTTGTACA-AGAGCCACAAATCCAAGTGTA--GAAGGGGAAATGTGACAAAT 8249 >seq4663 Length=104512 Score = 228 bits (252), Expect = 7e-55 Identities = 461/679 (68%), Gaps = 9/679 (1%) Strand=Plus/Plus Query 4256 TTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATT 4315 ||| || || | ||| ||| | | || ||||| ||||| || ||| |||| || ||||| Sbjct 34230 TTTCTGATACTGAGATTCTCTCCTATCAAAGAAGTTAGTCTTACCTACTAAAGATATATT 34289 Query 4316 TTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAG 4375 |||||||||||| || || || | || ||| |||| ||| || | | | | ||| Sbjct 34290 TTCCATAAAATCGAAAGGGTTGGCTGTGTTATAATATTTCTCCAATCCCAAATTAATAAG 34349 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 ||||| |||||| | |||||| ||||||| | ||| | || || || ||| | || | Sbjct 34350 CAATCTGTCAGCCATAAATTCAATATACTCACACATTAATTTACAATTCATTTCTATAAG 34409 Query 4436 TCTCACAGGTAGCGCGTATG-TCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494 | || |||| || || | ||||| | ||||||||| | || | |||| | | || Sbjct 34410 ATTTACTGGTAA-GCTTACACTTAAAAATTATTGTTCTATGATGACAGATTCTTTAACTA 34468 Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554 |||| ||| | | ||| || || | ||| ||| | ||| |||| Sbjct 34469 TATCGAGTATGTAAGG---AGAC---TTGTTAATTAAATATTTGTTAAGGTGACATGCAA 34522 Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614 ||||||| || | ||||| ||||||||||| ||||| || | || |||| | |||| Sbjct 34523 AATCACAGTGAAGTCCTTCATCTCTGCTAATAAGTTCATTGGCGAAGGTTAGGACAGGCA 34582 Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674 | | || | || || | ||| || || | ||||||| || ||||||||||| |||| Sbjct 34583 TCAGTCCACGATTCTTCAACCAGAAGATTGAAGCAAATGCACCCGAAAAGAATATTCCTT 34642 Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATT 4734 |||| ||||| ||||||| || | || || | | || || ||||||| Sbjct 34643 CTACACAAGCAAATGCTACTACACGAGTGGTAAATTAGATTCCGG-GTATTGTATCCATT 34701 Query 4735 TTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794 | || ||||||| |||||| ||||||| ||| || |||||| ||| | |||| || | Sbjct 34702 TCAAAGCCCAGTCAGCTTTCTTCTTAATGCATGGTATTGTGGTAATAACATTAAGCAAAT 34761 Query 4795 TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAAT 4854 | || | | | || |||||||| ||||||||||| |||||| || | || Sbjct 34762 GTGTCTTCTGATCCTGATCAGTAATATAAGCATCTATTAGTAGAGAATACATCTCGGTAT 34821 Query 4855 GTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTT 4914 | ||||| ||||| || | || ||||| ||||||||| | |||| | ||| |||| Sbjct 34822 GGATATTCTCTATTGCTACTTGGAATCCATAAAAGCATTTTGCTTTTAGTACAATCACTT 34881 Query 4915 CGTTACAAAATCTTTCTAC 4933 | || |||||||||||| Sbjct 34882 CAGTAATAAATCTTTCTAC 34900 >seq5663 Length=92856 Score = 161 bits (178), Expect = 8e-35 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 ||| |||||||| || || || || |||||||| |||||||| || |||| ||| || || Sbjct 71996 TACCAAGTTTTCATTCACAATGCCATCACTGGCAGCAAAAAAGGCTAAAATATGGGAGAT 71937 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 ||| | || ||| || || || | ||||| ||| | || |||||| | ||| ||||| Sbjct 71936 AAAATGCTTTTCTTCCGGTTTTAATTTTTCCCAATCTATCAGATCTTTTGATAAGTCAAC 71877 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA 5110 ||||||| |||||||||| || ||||| ||||| |||||||| ||| || || |||| Sbjct 71876 TTCTTCAGCAGTCCAAAATGATGCTTCAGCTTTCTTGTACATTTGCCAGATGTCCTGATA 71817 Query 5111 CTGAATCGGAAGTATGACAAATCT 5134 || ||| |||| ||||||||| || Sbjct 71816 CTCAATAGGAAATATGACAAACCT 71793 Score = 113 bits (124), Expect = 4e-20 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871 |||| ||||||||| ||||| || ||||| |||||||||||||||| |||||| || || Sbjct 73657 TCTTTAATATAAGTATCTATAAGAAGGCTGTACATTTCAGAATGTACATTTTCAATGGCG 73598 Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCT 4931 || || || || ||||| || || ||||| || ||||||||||| | | ||| ||||| Sbjct 73597 ATTTGGAACCCATAAAAACACCTTGCTTCAGTCACTTGAACTTCTTGGCTAAACCTTTCA 73538 Query 4932 ACTAAGTTTT 4941 || | |||| Sbjct 73537 ACCTATTTTT 73528 Score = 100 bits (110), Expect = 2e-16 Identities = 159/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || |||||||| || || || || || || || || ||||| ||||||||||| || Sbjct 79464 TCATCTCTGCTTATTAGCTCATTGCTGAATGTCAAACCAGGCATCAAACCTCTCTTCTTC 79405 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 | ||| || |||| ||||| || ||||| |||||||| ||||| || || ||||| || Sbjct 79404 AACCAGAAAATAGAAGCAAAAGAGCCAGAGAAGAATATTCCTTCAACTGCAGCAAATGCA 79345 Query 4692 ACTAATCGGGACCCGAACGA---GCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTA 4748 |||| ||| || || || || ||| | | ||||| || | ||||| | | Sbjct 79344 ACTACTCGCTCACCAAAGGAAGCACTCGCTGAG---CTGATCCAGTTAAGAGCCCAATCA 79288 Query 4749 GCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTT 4795 || || ||||| || ||||| | || | ||||| || ||||| || Sbjct 79287 GCCTTCTTCTTGACACACGGTAGAGTTTCAATAGCATTGAATAACTT 79241 >seq77092 Length=4929 Score = 143 bits (158), Expect = 2e-29 Identities = 257/371 (69%), Gaps = 11/371 (3%) Strand=Plus/Minus Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498 ||| |||| || | ||| ||||| ||||| || || ||||||| ||| | || | Sbjct 392 CACTGGTAATGCCTCTGTTAAAAATTCTTGCTCAATCCTTACGGCGCCTGACACAATTTG 333 Query 4499 TTTTATTTTATCTTTAGATGGTTTATTT---AC-TAAGTATCCAA-ACAATAAACACGCA 4553 | || | | |||| ||||||| ||| || ||| || || |||| | | ||| Sbjct 332 TACAATGTCCTGTTTACATGGTTTGTTTTTGACATAATGATGGAACACAAGTGAGAGGCA 273 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 |||||||| || | ||||| |||| ||||||| |||||| |||||||||||| ||| Sbjct 272 AAATCACAGTGTAGTCCTTCATCTCGACTAATCAATTCGTTGCTAAACGTTAATCCAGGC 213 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 ||||| || | || || | || ||| || || ||||| | | || || || || ||| Sbjct 212 ATTAATCCCCGTTTCTTTAACCGAAAAATGGCCGCAAAGCAACATGAGAAAAAGATTCCT 153 Query 4674 TCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCAT 4733 || || |||||||| || || |||| | || || ||| || || ||||| Sbjct 152 TCCACAGCGGCAAAGGCCACCTATCGTTTTGCAAA--AGATGGATT----TTGTATCCAA 99 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAAT 4793 ||||||||||| | || |||||||||||| | || || | || |||||||| ||| Sbjct 98 TTTAATGCCCATTCTGCCTTTTTCTTAACGAAAAAAAGAGTTTCAATGGCGTTAAACAAT 39 Query 4794 TTACTTTTTTC 4804 || ||||||| Sbjct 38 ATATTTTTTTC 28 >seq76486 Length=4962 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 7/232 (3%) Strand=Plus/Minus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 || || ||||| |||| ||||||| ||||| |||||||||||| |||||||| || Sbjct 225 TGTAATCCTTCATCTCGACTAATCAACTCGTTGCTAAACGTTAATCCAGGCATTAATCCC 166 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | || || | |||||| || || ||||| || ||||| || || || ||||| || ||| Sbjct 165 CGTTTCTTTAACCAAAAAATGGCCGCAAAGGAACCAGAGAAAAAGATTCCTTCCACAGCG 106 Query 4683 GCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCC 4742 ||||| ||||| ||| | | | || || | | || || ||||| || |||||| Sbjct 105 GCAAAGGCTACCAATTGTTATGCAAA--AGATAGATT----TTGTATCCAATTAAATGCC 52 Query 4743 CAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATT 4794 || | || ||||| |||||||| | || || | || |||||||| |||| Sbjct 51 CATTCTGCCTTTTT-TTAACGCAGGAAAGGGTTTCAATGGCGTTAAACAATT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426111531638588