Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq12585 89.7 3e-13 >seq12585 Length=48618 Score = 89.7 bits (98), Expect = 3e-13 Identities = 165/236 (70%), Gaps = 12/236 (5%) Strand=Plus/Minus Query 48308 ATCCCCGGATCCATGGGCACCAAGTCCTATGTCGTCCGCGGCAAAGGGAATGAGTCCGGC 48367 |||||||| |||||||| ||||| || |||| |||||| ||||| ||| | Sbjct 43486 ATCCCCGGCTCCATGGGGGCCAAGAGCTTCATCGTACGCGGCCTGGGGAACGAGGAAGCG 43427 Query 48368 CTCTTCTC-TGCGCCCCATGGTGCCGGCCGTCAGTATTCGC-GCACCCAGGCCAAGAAGC 48425 ||| ||| ||| || | || |||||||| | || || | ||| |||| ||||||| Sbjct 43426 TTCTGCTCCTGCAGCC-ACGGCGCCGGCCGA-ACCATGAGCCGTACCAAGGCGAAGAAGC 43369 Query 48426 TGTTCACCCTGGATGACCTCGCCGACCGAATGAAGGGCA----TCGAATACCGCCACGGC 48481 |||| ||| |||| |||| || | | | ||| |||||| ||| | | | Sbjct 43368 TGTTTACCGTGGACGACCA----GATCAAGGCCACGGCCCACGTCGAATGCCGAAAGGAC 43313 Query 48482 GAAGAGTGGATCGACGAGATCCCGGACGCCTACAAGGACATCGACCAGGTGATGGA 48537 | || ||||||||| |||||| ||||||||||||||||||||||| ||||| Sbjct 43312 GCCGACGTGATCGACGAAATCCCGATGGCCTACAAGGACATCGACCAGGTAATGGA 43257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 297265581107600