Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq10932 224 2e-54 seq164699 125 1e-24 seq137943 107 4e-19 seq103 107 4e-19 seq101083 95.1 3e-15 seq19112 95.1 3e-15 seq1110 95.1 3e-15 seq155771 93.3 9e-15 seq130330 86.0 1e-12 seq82744 80.6 6e-11 >seq10932 Length=55943 Score = 224 bits (248), Expect = 2e-54 Identities = 227/294 (77%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 20334 GGCACTGGCCGCCGCCCTGGTTGCGCCGTTCGAGGGGCGTTCGTTGGTGGCCTACCTGGA 20393 |||| |||| | |||||||| || |||||||||||| || |||||||||| || || Sbjct 27182 GGCA-TGGCGGGTGCCCTGGTGACGTGGTTCGAGGGGCGCTCCCTGGTGGCCTATCTCGA 27240 Query 20394 CCCAGTGGGAATCCCGACGATCTGCGAGGGCATCACCGCCGGCGTGCGCATGGGCGACAG 20453 ||| ||||| || || || |||||||| ||| |||| || || || | | |||||||| Sbjct 27241 CCCGGTGGGCATTCCCACAATCTGCGAAGGCGTCACTGCGGGGGTTCACTTGGGCGACGT 27300 Query 20454 GGCGACCCCGGCCGAGTGCGATGCACTGCTTGAACGCGAGCTGCAGCGCGCCGTCGATGC 20513 | ||| |||||||||||||| || ||||| | ||| || ||| | | || Sbjct 27301 GAAGACGCCGGCCGAGTGCGACGCGCTGCTGCAGAAGGAGTTGGCCATTGCCCTGAACGC 27360 Query 20514 CGTGGACCGCCAGGTCCTGGTGCCGCTGCCCGACACCCGCCGCGCCGCCCTGGGCTCGTT 20573 ||| || |||||||| ||| || || ||||||| || ||||| || || |||| ||||| Sbjct 27361 CGTTGAGCGCCAGGTGCTGATGGCGATGCCCGAGACTCGCCGTGCGGCGCTGGCATCGTT 27420 Query 20574 CGTCTACAACGTCGGCGAAGGCCAGTTGGCCCGCTCGACGCTGCTGCGCAAGCT 20627 ||| ||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 27421 CGTTTACAACGTCGGCGAAGGCCAGTTTTCCCGCTCGACGCTGTTGCGCAAGCT 27474 >seq164699 Length=1076 Score = 125 bits (138), Expect = 1e-24 Identities = 233/329 (71%), Gaps = 16/329 (5%) Strand=Plus/Minus Query 355 ATGAGCGAAAGCTTTGTCTGTCATTGTC-CAACCACT-GCTTGTATGGAG-TGGCAGCG- 410 ||| ||| ||||| | |||||||||||| || || || || | || ||| | | Sbjct 377 ATGGGCGCAAGCTGTATCTGTCATTGTCTCAGCCTGAAGCCGTTAGGTAGATGGTGGTGA 318 Query 411 GACTCGTTGTGCGACCAACGGTAGCCTAGGGAAACGTGCGTTGCTGGTAACGGCAGGGTG 470 ||| |||| | |||| |||||||||||| | |||||| |||||||||| ||||| Sbjct 317 GACCTTTTGTTCAGCCAAAAGTAGCCTAGGGATA-GTGCGTCACTGGTAACGGTGGGGTG 259 Query 471 CGAAGCTTTCCCGACAACGTAGCCCC-CG----CGAGGGTGCGAATTCACCGTGAGGTGA 525 |||||||| || ||||| |||| ||| || | |||| | ||||||||||||| Sbjct 258 CGAAGCTT-CCTGACAATGTAGTCCCACGATGTCTGTGGTGTGTGGTCACCGTGAGGTGC 200 Query 526 ACCGCAGAGGGTCGGAGTAGCACCGACCCAAGGCGCTAGGCTGACTGGTACGGGCAACCT 585 ||| | | ||| | ||| | |||||||||| ||||| || |||| | Sbjct 199 CATGCAAAACCTGCGAGCAACACGCGGGGGCGACGCTAGGCTGGTTGGTATGGTCAACGT 140 Query 586 AGGTGAACTGCTGATAAACACCGT--AAGGATTGACGAGCCAAAGCTGCTGACAGGC-TC 642 | |||||||||||||||||||||| | | || ||||||||| ||||||||||| || Sbjct 139 AAGTGAACTGCTGATAAACACCGTCAACCGCATG--GAGCCAAAGTTGCTGACAGGCTTC 82 Query 643 GAACCAAAAGGTACGTGGTCGGTTATCTC 671 || | ||| ||| | || |||| |||| Sbjct 81 GACCAAAATGGTGCATGACTGGTTGTCTC 53 >seq137943 Length=1264 Score = 107 bits (118), Expect = 4e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 1247 GGGCCTGTAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCTGGGTTCAAG 1188 Query 2914 TCCGTGTGGGCCCACCA 2930 ||| | |||||||||| Sbjct 1187 TCCCAGCGGGCCCACCA 1171 >seq103 Length=407632 Score = 107 bits (118), Expect = 4e-19 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 301208 GGGCCTGTAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCTGGGTTCAAG 301267 Query 2914 TCCGTGTGGGCCCACCA 2930 ||| | |||||||||| Sbjct 301268 TCCCAGCGGGCCCACCA 301284 >seq101083 Length=2117 Score = 95.1 bits (104), Expect = 3e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913 |||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||| || Sbjct 2116 GGGCCTATAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCCGTGTTCAAG 2057 Query 2914 TCCGTGTGGGCCCACCA 2930 || |||||||||||| Sbjct 2056 TCACGGTGGGCCCACCA 2040 >seq19112 Length=29680 Score = 95.1 bits (104), Expect = 3e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913 |||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||| || Sbjct 3281 GGGCCTATAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCCGTGTTCAAG 3340 Query 2914 TCCGTGTGGGCCCACCA 2930 || |||||||||||| Sbjct 3341 TCACGGTGGGCCCACCA 3357 >seq1110 Length=205023 Score = 95.1 bits (104), Expect = 3e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913 |||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||| || Sbjct 34458 GGGCCTATAGCTCAGTTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCCGTGTTCAAG 34517 Query 2914 TCCGTGTGGGCCCACCA 2930 || |||||||||||| Sbjct 34518 TCACGGTGGGCCCACCA 34534 >seq155771 Length=1128 Score = 93.3 bits (102), Expect = 9e-15 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9264 CCGTACCGCCGAAAAGTTCGTAGTGCGCCTACCTGACGGCATGCGCGATCGGGTCGCGGA 9323 ||| || ||||| || || || || ||||| || ||||| |||||||| || || | || Sbjct 30 CCGCACAGCCGACAAATTTGTTGTACGCCTGCCCGACGGGATGCGCGAGCGCATCTCCGA 89 Query 9324 GACTGCGCGGGACAACCATCGCAGCATGAATTCGGAGATCATCGCCCGCTTGGAACAGA 9382 ||||| || | |||||||||||||| |||||||| ||||| ||| ||||||||| Sbjct 90 TGTCGCGCGCAACCATCATCGCAGCATGAACTCGGAGATTATCGCTCGCCTGGAACAGA 148 >seq130330 Length=1343 Score = 86.0 bits (94), Expect = 1e-12 Identities = 94/122 (77%), Gaps = 6/122 (5%) Strand=Plus/Plus Query 3083 AAATGGGCATAGCGCATGGTCATCTGTAGCGAGGCATGGCCCAGGACCCGCTGCAACGTG 3142 || || |||||||||||||||||| | ||||| ||| ||||||||| |||||| || Sbjct 215 AAGTGTGCATAGCGCATGGTCATCGTCACCGAGGAATGCCCCAGGACCTTCTGCAAGGTC 274 Query 3143 ATGATGTCGCCACCGTTGCGCAT---GTAGTGGCTCGCGAACGTGTGCCGCAGGACGTGT 3199 | ||||| |||||| || ||| | |||| || ||||| ||||||||||| || || Sbjct 275 AGGATGTTGCCACC--AGC-CATGACGAAGTGACTGGCGAAGGTGTGCCGCAGCACATGC 331 Query 3200 GT 3201 || Sbjct 332 GT 333 >seq82744 Length=3985 Score = 80.6 bits (88), Expect = 6e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 2885 ACTCATAATCCTTTGGTCCACGGTTCGAGTCCGTGTGGGCCCACCACCTTCAAAGCCGCG 2944 ||||||||||||||| |||||| | |||||| | |||| | ||| ||||||||||||| Sbjct 415 ACTCATAATCCTTTGCTCCACGATCCGAGTCTGCGTGGATCTGCCATCTTCAAAGCCGCG 356 Query 2945 CACTGCGCGGCTTTCGCCT 2963 || ||| |||||| |||| Sbjct 355 CATTGCTTGGCTTTTGCCT 337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104093530492168