Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq5 152 5e-32 seq96199 120 3e-22 seq7 104 2e-17 seq97077 95.1 1e-14 seq4 91.5 2e-13 seq29819 87.8 2e-12 seq5373 87.8 2e-12 >seq5 Length=869209 Score = 152 bits (168), Expect = 5e-32 Identities = 299/435 (69%), Gaps = 9/435 (2%) Strand=Plus/Minus Query 142296 ATCAAAGTTCAATCCTAATGGAACATCCGCCGAACGTTGATAAACGGTCACATGCAAAGT 142355 || ||| |||| ||| | || ||||| |||||||||| |||| || || | Sbjct 100441 ATTAAAATTCAGTCCCAGCGGTACATCACAGCTACGTTGATAAGACGTCAGATACAGCTT 100382 Query 142356 ATCATGTACTAAAGAAAAAGTATATGTGTGTACGCATGAACGTAAACATCCTAATTCAAT 142415 ||| | |||| ||| |||| || || | || | || | ||| || | ||||| Sbjct 100381 ATCTCCCAGTAAACTAAAGGTATGGGTATGCATACAGGGCCGCAGACAACCAAGTTCAAA 100322 Query 142416 TTCACCAGGGTTCCAGTAAGAAAGAATTTCACCACGATCGTCGATACCC--GCTGACAGG 142473 ||||||||||| | | | || || || ||||||||||||| ||| ||| |||| Sbjct 100321 CTCACCAGGGTTATAAAAGGTCAGGATCTCGGCACGATCGTCGATCCCCTTGCT--CAGG 100264 Query 142474 TTTTCATAGATTTTACGAAGTTGATCGAC--TTCA-CCATTAGGACCAACCCAATGTCTG 142530 || |||||| |||||||| | || | |||| || |||| | | | Sbjct 100263 TTGCTGACGATTTTTGCCAGTTGATCTAAAGTTGAGCCATCGGGCTTCTGCCAACGCCGG 100204 Query 142531 CCCTGTACACCATAAACCCGGCCCATATCGTCTTCACCTTTACGATTTGGGTTTTTTAAC 142590 || || |||||||| |||||||||||||| |||||||| ||||||| ||||| | |||| Sbjct 100203 CCTTGCACACCATATACCCGGCCCATATCATCTTCACCCTTACGATGCGGGTTATCTAAC 100144 Query 142591 CATGCTTCATTCTCATTGGCATTAGCATTCCAAGTATTTGTACCAAGTGCCCGGAAATCT 142650 || || | ||| || |||||||| |||||||| ||||| ||| | || ||||| | | Sbjct 100143 CAGGCCTGATTTTCGTTGGCATTCGCATTCCAGGTATTACAACCGATAGCACGGAATTGT 100084 Query 142651 GCTGCAGACGACA-GACCACGAATATAACCCAGCAGTTCGGCAATGGATGCTTTATAAAA 142709 || ||| | || ||| | | || || | || ||| ||||| | |||||| ||| | Sbjct 100083 GCGGCA-CTGTCATAACCCCTTAAGTATCCTAACAATTCAGCAATCGCTGCTTTGTAATA 100025 Query 142710 ACTTTTACGAGTGGT 142724 ||||||||| || || Sbjct 100024 ACTTTTACGTGTCGT 100010 Score = 95.1 bits (104), Expect = 1e-14 Identities = 315/482 (65%), Gaps = 6/482 (1%) Strand=Plus/Minus Query 139559 GCATCATACATACCTTCAACTTCATGCGGACTGAATAATGTGATATAGTCGTTTTTAATA 139618 |||||||||| || || ||| || ||||| || ||||||||||| | |||||| Sbjct 711243 GCATCATACAGCCCCGGCACATCAGAGGGGCTGAACAAGGTGATATAGTCATCTTTAATC 711184 Query 139619 TAACGTTCGAT-CATTAAGTCATTAATCTGGACACCATAATCTAAATGACGAATACGGTT 139677 || | ||| ||| | | |||| ||| || ||||| || | ||| | | ||||| Sbjct 711183 AGGCGCT-GATACATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGGTT 711125 Query 139678 TTCATCGATACCTTTATTATTCTTCAGTACGATTAATTTTTCATATTCCAGATGCCACAT 139737 || || | ||| ||||| |||||||| | | ||| |||||||||||||| Sbjct 711124 CTCTTCTACACCGCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCACAA 711065 Query 139738 CGGATAATATAATGTCGCCGCACCACCACGTACACCACCTTGTGAACATGATTTCACTGA 139797 || || | | || || ||||||||||| ||||| ||||| || || ||| |||| Sbjct 711064 GGGGTAGAACAGGGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACTGC 711005 Query 139798 TGCCTGATGAGTTTTCCAGAATGGAATAACACCAGTGTGACGAACTTCGCCCGCGCCAAT 139857 | ||| | || | || || ||| ||||| ||| ||||||| | || Sbjct 711004 GGTCTGGAAATGCTTATAAAACGGGATACAGCCAGTATGAAAGGCTTCGCCATTACGGAT 710945 Query 139858 TTTAGAACCTTCTGCACG-ATACATACCAGCATTAACACCAATACCAGCACGTTTACTGA 139916 | |||| || || |||| || || |||| ||||||||| || || | | Sbjct 710944 TGGGCTACCTAAAGCGCGAATAC-GGCCTGCGTTAATACCAATACCTGCGCGCTGCGACA 710886 Query 139917 TGTACTTAATAAT-ACATTCGTTTGTCTTGTTAATTGAATCCAGCGAATCACCGCCTTCA 139975 ||| || | ||| || | | || || || |||||||| ||||| | ||| Sbjct 710885 CGTATTTTACAATGGCACT-GGAGGTGGCATTGATCGAATCCAGGCTGTCACCACACTCA 710827 Query 139976 ATAACAACACAAGAGCTAAACTGACGTGTCGGAGTTCTTACGCCCGCCATAATCGGAGTA 140035 || | || || ||||| |||||||| || || || | ||||||| |||||| || || Sbjct 710826 ATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGGTGTC 710767 Query 140036 GG 140037 || Sbjct 710766 GG 710765 >seq96199 Length=2664 Score = 120 bits (132), Expect = 3e-22 Identities = 454/704 (64%), Gaps = 10/704 (1%) Strand=Plus/Minus Query 142030 AATGGGTATTTAATTGGTTCGTGGTGTTGGTAGTTAACGATTTTAAAGTCATCTGTGGTA 142089 || || || ||||||| ||||| || || || | || ||| |||||| | ||| Sbjct 2603 AACGGATACTTAATTGCATCGTGACACTGATAACCTACTACTTCAAAATCATCTTTTGTA 2544 Query 142090 ACCCATGTCTCAACATCTTCCAGAGACTTGATGTTAGGGTTAATAATTAGTTGAGGCTCG 142149 ||||| | |||| ||||| | || || || || ||||| || ||| || ||| Sbjct 2543 ACCCAGCTTTCAATGTCTTCTAATGATTTAATATTTGGGTTTATTTTTAATTCTGGCGAC 2484 Query 142150 TCAAAGGGCTCACGGGAGATCTGTG--TCG-GCACCATAGGTAATTGGTCTTCATAGATA 142206 | || ||||| || | ||| || ||| || | ||||| |||||| ||| Sbjct 2483 GCGAAAGGCTCTCGCTTAAGTTGTACATCACGCATCAACTCAAGTTGGTTTTCATAAATA 2424 Query 142207 TGTGCGTTCACAATCTTATAGAACATTTTACCTGGCTTGTTCCGGGTGATTTGAGCCATC 142266 || || ||| | || |||| || ||||| || || | | ||| ||||| || | Sbjct 2423 TGCGCATTCGCTATTTTATGATACGCCTTACCCGGTTTATGTCCGGTTATTTGTGCAACT 2364 Query 142267 AGATGCAGGAATGTATACGCCTGGATTAAATCAAAGTTCAATCCTAATGGAACATCCGCC 142326 | | || || | | || ||| || |||||||| || | || ||||| Sbjct 2363 AAAGCAAGTAACACAAAACATTGAATTTGATTAAAGTTCAGACCCAGCGGCACATCACAG 2304 Query 142327 GAACGTTGATAAACGGTCACATGCAAAGTATCATGTACTAAAGAAAAAGTATATGTGTGT 142386 |||||| || || | | |||||||| | |||||||| || | ||||| Sbjct 2303 CTACGTTGGTATGATGTTAAGTATAAAGTATCGCCCAACAAAGAAAAGGTGTGCGTGTGC 2244 Query 142387 ACGCATGAACGTAAACATCCTAATTCAATTTCACCAGGGTTCCAGTAAGAAAGAATTTCA 142446 | || | |||||||| |||| |||| |||||| || || | ||| | |||||| Sbjct 2243 ATACAAGGGCGTAAACAACCTAGCTCAAATTCACCTGGATTATAAAAAGTGACGATTTCA 2184 Query 142447 CCACGATCGTCGATACCCGCTGACAGGTTTTC-ATAGATTTTACGAAGTTGATCGACTTC 142505 || ||||| || || || || | ||| || ||| |||| ||| ||||| | | Sbjct 2183 CCGCGATCATCAATTCCTTTCGATAAGTTATCGATAACTTTTTT-AAGCTGATCAAGGTG 2125 Query 142506 ---ACCATTAGGACCAACCCAATGTCTGCCCTGTACACCATAAACCCGGCCCATATCGTC 142562 ||||| ||| | |||| | || || |||||||| || ||||||||||| || Sbjct 2124 GCTACCATCAGGGCGTTGCCAACTGCGCCCTTGAACACCATACACACGGCCCATATCATC 2065 Query 142563 TTCACCTTTACGATTTGGGTTTTTTAACCATGCTTCATTCTCATTGGCATTAGCATTCCA 142622 ||||| |||||| || |||| | ||| |||| ||||| || || || |||||||| Sbjct 2064 CTCACCACTACGATGCGGATTTTCAAGCCACGCTTTGTTCTCGTTCGCGTTGGCATTCCA 2005 Query 142623 AGTATTTGTACCAAGTGCCCGGAAATCTGCTGCAGACGAC-AGACCACGAATATAACCCA 142681 ||| | || | | || || | ||| || | | | |||||| | |||||||| Sbjct 2004 AGTCATACAGCCGATATCACGAAACTGTGCAGC-GCTGTCGTAACCACGTAAATAACCCA 1946 Query 142682 GCAGTTCGGCAATGGATGCTTTATAAAAACTTTTACGAGTGGTG 142725 | | || || || | ||||| ||||| || || || |||||| Sbjct 1945 GTAACTCCGCTATCGCCGCTTTGTAAAAGCTCTTTCGCGTGGTG 1902 >seq7 Length=747525 Score = 104 bits (114), Expect = 2e-17 Identities = 72/82 (88%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459 ||||||| | ||| | ||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 439839 AAATGGCGCGCCCGATAGGATTCGAACCTATGACCCACGGCTTAGAAGGCCGTTGCTCTA 439898 Query 66460 TCCAGCTGAGCTAAGAGTGCAT 66481 |||| |||||||| | | |||| Sbjct 439899 TCCAACTGAGCTACGGGCGCAT 439920 >seq97077 Length=2523 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459 ||||||| ||||| ||||||||||||| |||| ||| ||||||||| |||||||||| Sbjct 2329 AAATGGCGCACCCGGAAGGATTCGAACCTTCGACCAACGCCTTAGAAGGGCGTTGCTCTA 2388 Query 66460 TCCAGCTGAGCTAAGAGTGCAT 66481 ||||||||||||| | | |||| Sbjct 2389 TCCAGCTGAGCTACGGGCGCAT 2410 >seq4 Length=924746 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 66403 TGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTATCC 66462 |||| | ||| |||| ||||||||| |||| ||||||||||||||| |||||||||| Sbjct 715560 TGGCGCGCCCGGCAGGGCTCGAACCTGCGACCCTCGGCTTAGAAGGCCGATGCTCTATCC 715501 Query 66463 AGCTGAGCTAAGAGTGCATT 66482 |||||||||| ||| ||||| Sbjct 715500 AGCTGAGCTACGAGCGCATT 715481 >seq29819 Length=16985 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459 ||||||| ||||| ||||| ||||||||| |||| | ||||||||||| | ||||||| Sbjct 14146 AAATGGCGCACCCGGCAGGACTCGAACCTGCGACCATCCGCTTAGAAGGCGGATGCTCTA 14087 Query 66460 TCCAGCTGAGCTA 66472 ||||||||||||| Sbjct 14086 TCCAGCTGAGCTA 14074 >seq5373 Length=95907 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 66400 AAATGGCACACCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 66459 ||||||| | || ||||||||||||||||||||| | ||||||||||| | ||||||| Sbjct 62079 AAATGGCGCGCCTGACAGGATTCGAACCTGTGACCATCCGCTTAGAAGGCGGATGCTCTA 62138 Query 66460 TCCAGCTGAGCTA 66472 |||| |||||||| Sbjct 62139 TCCAACTGAGCTA 62151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520938900560160