Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031030.1 Length=170788 Score E Sequences producing significant alignments: (Bits) Value seq5 132 5e-26 seq457 82.4 8e-11 >seq5 Length=869209 Score = 132 bits (146), Expect = 5e-26 Identities = 271/403 (67%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 139482 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 139541 || || ||||| |||| ||| | | ||||| |||||||| || ||||||||||| Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 139542 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 139601 || || || ||| ||||||| |||||| | || || | || || || || ||| Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 139602 CGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAAGGAATA 139661 || | || || || || || ||| ||||| ||||| ||||| || |||| || ||| Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 139662 ACACCAGTATGACGTACTTCACCCATGCCAATTTTAGAACCTTCAGCACGAATCATACCA 139721 ||||||||| |||| || | | ||| |||| ||| ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 139722 ACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTTA 139781 | ||||||||||| || ||||| | || | |||| ||||| | | ||| | | Sbjct 710916 GCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCA 710857 Query 139782 TTGATAGACTTCAATGAATCTCCTGCCTCAATAACGACGCATGAACTAAACTGCCGAGTT 139841 ||||| || | || || || |||||| | ||||| || || ||||| || ||| Sbjct 710856 TTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTT 710797 Query 139842 GGAGTACGACAGCCAGCCATAATAGGAGTTGGTAATGAAATCT 139884 || ||||| ||| | ||||||||| || || | |||||||| Sbjct 710796 GGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 >seq457 Length=273712 Score = 82.4 bits (90), Expect = 8e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 68831 GGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACCACTGAGCTAC 68885 |||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct 198094 GGATTCGAACCAGCGACCAATTGGTTAACAGCCAACTGCTCTACCACTGAGCTAC 198040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545162602538880