Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq163424 141 1e-28 seq11470 111 2e-19 seq21230 91.5 2e-13 >seq163424 Length=1083 Score = 141 bits (156), Expect = 1e-28 Identities = 210/298 (70%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 99466 GCATGAAACAATATTTGGAATTAATGAGTAAGGTTTTAAATGAAGGCGTTGTTAAAGGCG 99525 |||||||||||||| | || | ||| | | || | | ||| |||| | | Sbjct 697 GCATGAAACAATATCTCGACCTGATGCGCCACGTGCGCGAGAACGGCACCTTTAAGAGTG 756 Query 99526 ACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAATTTGGCTG 99585 | || || ||||| || || | | ||||||| ||||| ||||| ||| || |||| | Sbjct 757 ATCGCACCGGCACCGGCACTTACAGTGTGTTTGGCCATCAGATGCGCTTTGATCTGGCCG 816 Query 99586 AAGGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCTATTATTCATGAACTCC 99645 | || ||||| ||||| || || ||| ||||| ||| || || || || || || | Sbjct 817 AGGGCTTTCCGCTGGTGACCACCAAGAAGTGTCATCTCAAGTCCATCATCCACGAGCTGC 876 Query 99646 TTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGTCACTATCT 99705 | ||||| || | || |||||||| | || ||| ||||| || ||||||||| | |||| Sbjct 877 TGTGGTTTTTGCAGGGCGATACCAACATCCGGTATCTGAAGGAAAACGGCGTCTCCATCT 936 Query 99706 GGAATGAGTGGGAAAACGAGAACGGTGACTTAGGACCGGTATACGGAAAGCAGTGGCG 99763 || | ||||||| | ||||||| || ||| | || ||||| || || | |||||||| Sbjct 937 GGGACGAGTGGGCAGACGAGAATGGCGACCTGGGGCCGGTCTATGGCTATCAGTGGCG 994 >seq11470 Length=53368 Score = 111 bits (122), Expect = 2e-19 Identities = 151/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 99510 GGCGTTGTTAAAGGCGACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATG 99569 |||| || || || |||||||| || || ||||| || | ||||| ||||||||| Sbjct 34898 GGCGGTGACAAGGGTGACCGTACAGGTACAGGTACACGTTCGGTATTTGGTCATCAAATG 34839 Query 99570 CGTTTTAATTTGGCTGAAGGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCT 99629 |||||| || | || |||||||||| | | || |||||| |||| | ||||| Sbjct 34838 CGTTTTGATCTTTCTAAAGGTTTTCCATTACTAACCACTAAGAAAGTTCACTTTCGTTCA 34779 Query 99630 ATTATTCATGAACTCCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGAT 99689 ||| | ||| || ||||||||||| ||||| ||||| || || || || ||||| Sbjct 34778 ATTGTAATTGAGCTTCTTTGGTTCCTCAAAGGTGATACTAACGTTCAATATCTCAAAGAC 34719 Query 99690 AACGGCGTCACTATCTGGAATGAGTGGGAAA 99720 || |||||||| ||| |||| |||| || Sbjct 34718 AATAAAGTCACTATTTGGGATGAATGGGCAA 34688 >seq21230 Length=25512 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 99519 AAAGGCGACCGTACTGGCACTGGTACGTTGTCTCTGTTTGGGCATCAAATGCGTTTTAAT 99578 || |||||||||||||| || || || || | ||||| ||||||||||||||| || Sbjct 9157 AAGGGCGACCGTACTGGTACAGGAACACGTTCAGTATTTGGTCATCAAATGCGTTTTGAT 9098 Query 99579 TTGGCTGAAGGTTTTCCTCTGGTCACTACTAAGCGCTGTCACCTCCGTTCTATTATTCAT 99638 || || | ||||| || || |||| || || || |||| || || | | Sbjct 9097 TTATCTAACGGTTTCCCACTACTCACCACAAAAAAAGTACATTTCCGCTCAATCGTCATT 9038 Query 99639 GAACTCCTTTGGTTCCTGAAAGGGGATACCAATACCCAGTACCTGAAAGATAACGGCGTC 99698 ||||| |||||||| || ||||| ||||||||| || ||| | ||||| || || Sbjct 9037 GAACTACTTTGGTTTCTTAAAGGTGATACCAATGTTCAATACTTAAAAGACAATAAAGTG 8978 Query 99699 ACTATCTGGAATGAGTGG 99716 || || ||| |||| ||| Sbjct 8977 ACGATTTGGGATGAATGG 8960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 732620914688160