Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031045.1 Length=157855 Score E Sequences producing significant alignments: (Bits) Value seq5 113 5e-20 seq51 102 8e-17 >seq5 Length=869209 Score = 113 bits (124), Expect = 5e-20 Identities = 287/429 (67%), Gaps = 12/429 (3%) Strand=Plus/Minus Query 91516 CAGGCGCTCGAACATGACGCGGTTAATCTGAATCCCATAGTCGATACGGCGTTCACGGTT 91575 |||||||| |||| | |||||||| ||| | |||||||| | | | | | | ||||| Sbjct 711184 CAGGCGCTGATACATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGGTT 711125 Query 91576 CTCTTCCAATCCACGGTTGTTTTTGAGAACAACGACATCATCAAATTGATAATGCCAGAT 91635 |||||| | || ||||| ||||| || || | | || | || |||||| | Sbjct 711124 CTCTTCTACACCGCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCACAA 711065 Query 91636 GGGAACATAGCATGTTGCCGAT-CCACCACGGATACCGCCTTGAGAGCAAGACTTCAGGG 91694 ||| | | || | || || |||||||| | ||||||||| ||||| || | | Sbjct 711064 GGGGT-AGAACAGGGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACTG 711006 Query 91695 CACCAGTC---AAATACTTGATGAAT--GGAACCAGACCTGTATGGACCATTTCCCCTTT 91749 | ||| |||| ||| || || ||| ||| || ||||| | ||| || || Sbjct 711005 CG---GTCTGGAAATGCTT-ATAAAACGGGATACAG-CCAGTATGAAAGGCTTCGCCATT 710951 Query 91750 ACGGATAGGGCTACCGATGCCACGAATTGCCCCAACATCGAATCCGATGCCAGCACGTTT 91809 |||||| |||||||| | | ||||| || | | | || || || || || | Sbjct 710950 ACGGATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCTG 710891 Query 91810 GGAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAGTCCAATGTGTCACCAGT 91869 || || || | || ||| | | |||||||| || || |||| |||||||| Sbjct 710890 CGACACGTATTTTACAATGGCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACA 710831 Query 91870 TTTGATCAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGGACGCCGGACATAATAGG 91929 | |||| ||| || ||||||||||| ||||| ||||| || ||||| ||||||||||| Sbjct 710830 CTCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGG 710771 Query 91930 TGTTGGAAG 91938 ||| || || Sbjct 710770 TGTCGGCAG 710762 >seq51 Length=473680 Score = 102 bits (112), Expect = 8e-17 Identities = 73/83 (88%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 19035 AATTTTGGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGG 19093 |||| |||||| ||||||||| |||||||||| |||||||||||||||| ||||||||| Sbjct 469222 AATTCAGGCCCCATAGCTCAGTTGGTTAGAGCACTCGACTCATAATCGATCGGTCGCTGG 469281 Query 19094 TTCAAGTCCAGCCAGGGTCACCA 19116 ||| |||||||| ||| ||||| Sbjct 469282 TTCGAGTCCAGCTGGGGCCACCA 469304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503870242226400