Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq5 109 6e-19 seq100896 84.2 2e-11 >seq5 Length=869209 Score = 109 bits (120), Expect = 6e-19 Identities = 307/468 (66%), Gaps = 10/468 (2%) Strand=Plus/Plus Query 151992 AGATTTCATTGCCAACTCCTATTATGGCTGGTTGTCGTACTCCTACTCGACAGTTCAGTT 152051 |||||||| |||| || ||||||||| | || ||||| || || || |||||||| | Sbjct 710754 AGATTTCACTGCCGACACCTATTATGTCGGGCGTGCGTACCCCAACCCGTCAGTTCAGCT 710813 Query 152052 CATGCGTTGTTATTGAGGCAGGAGATTCGCTGAAGTCTATCAATAAGGCTTCTGCTTCAA 152111 | ||||| | |||||| || || ||| | || |||||| | || | | | Sbjct 710814 CCTGCGTACTGATTGAGTGTGGTGACAGCCTGGATTCGATCAATGCCACCTCCAGTGCCA 710873 Query 152112 TTGTTGAATATATCTCCAAACGAGCTGGAATCGGCATTAACGTTGGTATGATTCGTGCCG 152171 |||| |||| | || | || || || || || ||||||| || ||||| || Sbjct 710874 TTGTAAAATACGTGTCGCAGCGCGCAGGTATTGGTATTAACGCAGGCCGTATTCGCGCTT 710933 Query 152172 AAGGTTCTAAGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAAC 152231 |||| || | | || |||| |||||||| ||| || |||| || | Sbjct 710934 TAGGTAGCCCAATCCGTAATGGCGAAGCCTTTCATACTGGCTGTATCCCGTTTTATAAGC 710993 Query 152232 ATTTTCAGACTGCTGTTAAATCATGCTCACAGGGTGGAATTCGTGGCGGCGCTGCTACTG 152291 |||| ||||| || || ||| ||||| || || || | ||||| || || || || Sbjct 710994 ATTTCCAGACCGCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCC 711053 Query 152292 CTTATTATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAAG 152351 | || || | |||||| ||||||| ||| || || || ||||||||||| | Sbjct 711054 TGTTCTACCCCTTGTGGCATCTGGAAGTGGAATCGCTGCTGGTACTGAAAAATAACCGCG 711113 Query 152352 GCGTAGAAGAAAACCGCATCCGTCATATGGATTATAGTGTTCAGCTGAA-----TGATTT 152406 | |||||||| ||||| | | ||| |||| ||| | || ||| | || |||| | Sbjct 711114 GTGTAGAAGAGAACCGGGTAAGGCATCTGGACTATGGCGTGCAGTTTAACCGCCTGATGT 711173 Query 152407 GATGATGGAACGATTCGGAAAGAATGATTATATTACTTTGTTCAGTCC 152454 || | | |||| |||| |||| ||||| || |||||||| || Sbjct 711174 -ATCAGCGCCTGATT---AAAG-ATGACTATATCACCTTGTTCAGCCC 711216 >seq100896 Length=2131 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 153219 TATCAGCACTTATGCCATGTGAGTCATCTTCCCAAGTTTCTAACAGTACAAATGGTATCG 153278 |||| || |||||||| | ||| |||| || ||| | |||||| ||||||||||||| Sbjct 17 TATCTGCCCTTATGCCTTCAGAGACATCATCGCAAATCTCTAACGCGACAAATGGTATCG 76 Query 153279 AGCCTCCACGTGGACCAGTCTCTGTTAAAGAATCAAAAGAGGGCTCCTTTAATCAAGTCG 153338 |||| |||||||| | || |||||||| | ||||| || ||| || ||||| | Sbjct 77 AGCCACCACGTGGTCATATCAGTGTTAAAGCAAGTAAAGATGGTATCTTAAAGCAAGTAG 136 Query 153339 TGCC 153342 |||| Sbjct 137 TGCC 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545105132308800