Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq50 201 3e-47 seq34866 154 4e-33 seq4461 114 3e-21 seq142399 104 6e-18 seq164795 100 8e-17 >seq50 Length=481860 Score = 201 bits (222), Expect = 3e-47 Identities = 210/276 (76%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 26926 GATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACC 26985 |||||| |||||||| ||||| |||||||||||||| ||| ||||||||| ||| Sbjct 154952 GATTTCGGTGGTGTAACGCTCTACGCCTTGCTGATCCTGCCACTTACGGGTTTTCAGCTT 154893 Query 26986 GCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTT 27045 |||||| || ||||||| |||||| ||||| ||||| || || ||||| ||||| Sbjct 154892 GCCTTCGATATACACCTTAGAGCCTTTACGCAGATATTCGCCGGCAATTTCTGCCAGACG 154833 Query 27046 GCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATC 27105 | | || || || ||||||||||| || |||||||| |||||| || || ||||| Sbjct 154832 CTGGTAAATTACGACCCGGTGCCATTCGGTTTGCTCTTTCATTTCGCCGGTAGCTTTATC 154773 Query 27106 TTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTA 27165 |||||| |||| | || |||||||| || || || || ||||| || |||||| || Sbjct 154772 TTTCCAGCTTTCAGAGGTCGCAATGCTCAGGTTAGCGACGGCGCCGCCCTGCGGCATATA 154713 Query 27166 GCGCACTTCTGGATCGTTGCCTAAATTACCGATTAA 27201 || ||||| ||||| | ||| | |||||||||||| Sbjct 154712 ACGGACTTCCGGATCCTGGCCCAGATTACCGATTAA 154677 >seq34866 Length=13211 Score = 154 bits (170), Expect = 4e-33 Identities = 202/275 (73%), Gaps = 10/275 (4%) Strand=Plus/Plus Query 26926 GATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACC 26985 |||||| || ||||| || |||| ||||||||||||||||| ||| | | || Sbjct 5650 GATTTCTGTAGTGTATTTTTCTTGGCCTGATTGATCAGTCCATTTACGCGTTTGTAAACG 5709 Query 26986 GCCTTCAATGAACACCTTGCTG--CCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGC 27043 ||||| ||| ||| |||| || ||||| || |||||||||||||| | ||| || || Sbjct 5710 ACCTTCGATGTACA-CTTG-TGAACCTTTACGAAGGTATTCACCAGCAACTTCTGCTAGT 5767 Query 27044 TTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTA 27103 ||||| || | || || ||||||||||| || |||||| || |||||| ||| Sbjct 5768 TTGCCAAATAACACGACACGGTGCCATTCAGTACGCTCTTGCATTTGCCCTGTGTTTTTA 5827 Query 27104 TCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCA---CCTGACGGC 27160 |||||||| | || || || |||||||||| ||| | || ||||| || ||| Sbjct 5828 TCTTTCCAGCTATCTGTCGTAGCAATGCTGATATTCG---CTACGCCATTGCCATTAGGC 5884 Query 27161 ATGTAGCGCACTTCTGGATCGTTGCCTAAATTACC 27195 || || || ||||||||||| | |||||||||||| Sbjct 5885 ATATAACGTACTTCTGGATCTTGGCCTAAATTACC 5919 >seq4461 Length=107335 Score = 114 bits (126), Expect = 3e-21 Identities = 184/262 (70%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 26924 TTGATTTCAGTGGTGTAGCGCTCAACGCCT---TGCTGATCAGTCCATTTACGGGTTCGC 26980 ||||| || ||| ||||||| || || |||| || ||| || ||||| || Sbjct 83975 TTGATCTCGGTGCTGTAGCGGTCCTGCCCGGTCTGCTTGTCCTGCCACTTGCGGGTATGC 84034 Query 26981 AGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCC 27040 || ||| || | | | |||| ||| ||||||||||||||||| |||||||||||| Sbjct 84035 AGCGAGCCCTCGAGATAAATCTTGGAGCCCTTGCGCAGGTATTCACCGGCGATTTCCGCC 84094 Query 27041 AGCTTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTT--TTGGTTCGCCTGTGG 27098 || ||| ||| || ||||| ||||||||||||||||| | ||| | || || Sbjct 84095 AGGCGACCGTAGAAAACCACGCGATGCCATTCCGTCTGCTCCTGCATGG--CTCCGGTAT 84152 Query 27099 CCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACG 27158 ||| || ||| | ||| | || || | | ||| |||||| || ||||| || |||| Sbjct 84153 TCTTGTCCCGCCAGCTCTCGCTGGTAGCCACGGTGACATTGGCGACCGCGCCGCCGGACG 84212 Query 27159 GCATGTAGCGCACTTCTGGATC 27180 ||| || || ||||| ||||| Sbjct 84213 GCAGATAACGGACTTCGGGATC 84234 >seq142399 Length=1225 Score = 104 bits (114), Expect = 6e-18 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 19428 GATCGTTGCCGCTGGTGGTCAGTCAGGCATTGCCACCAAAGAACTGACCGCGTTTGCTGA 19487 |||| |||| || || ||||||||||||||||||| | || || | | |||||| | Sbjct 1217 GATCTTTGCAGCAGGCGGTCAGTCAGGCATTGCCAAGCATGAGTTGTCTACATTTGCTCA 1158 Query 19488 ATCCGCCATCAAAATGGGTGTGGCGTTCGATATCACGGCAGACGAGGCAGGGCAGGCAAT 19547 | |||||||| ||||||||||| |||||| | | || || |||||||| |||||||| Sbjct 1157 AGATGCCATCAAGATGGGTGTGGCATTCGATGTATCTGCCGAGGAGGCAGGACAGGCAAT 1098 Query 19548 GGCCGAAATGCG 19559 | | || ||||| Sbjct 1097 GTCAGAGATGCG 1086 >seq164795 Length=1075 Score = 100 bits (110), Expect = 8e-17 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 26908 GCCATTCATGCCCACGTTGATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCA 26967 ||| | |||| | ||| ||||||| |||||||| |||| | || | || || ||| Sbjct 332 GCCCTGCATGTCGACGATGATTTCGGTGGTGTAACGCTTGATACCGTCCTTTTC---CCA 388 Query 26968 TTTACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACC 27027 | ||||| |||| ||| || ||| |||||| || |||||||||||||| || Sbjct 389 CTCGCGGGTCTGCAGCTTGCCCTCGATGTACACCTGCGAACCCTTGCGCAGGTATTCGCC 448 Query 27028 AGCGATTTCCGCCAGCTTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTC 27081 ||||| || || | ||||||||| | | ||||||||||||| || |||| ||| Sbjct 449 GGCGATCTCGGCGACCTTGCCGAACAGGGCAACGCGGTGCCACTCGGTCTTCTC 502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133729165220160