Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031059.1 Length=38773 Score E Sequences producing significant alignments: (Bits) Value seq32904 114 3e-21 >seq32904 Length=14225 Score = 114 bits (126), Expect = 3e-21 Identities = 185/257 (72%), Gaps = 12/257 (5%) Strand=Plus/Minus Query 11741 CCGATCCGCGAAATCGTCATTCACTGCTCGGCCACCCCGCCCGACTGGAAGTCCGGC-GA 11799 || ||||| || |||||||| ||||| |||| |||| || || |||| | ||| || Sbjct 265 CCCATCCGTGAGATCGTCATCCACTGTGCGGCGACCCGTCCGGATTGGATGAGTGGCCGA 206 Query 11800 CAGCCTGTTCGAGAAGCGCGCCGAGATCCGGCGCTGGCATGTGCAGGGCAACGGCTGGTC 11859 | || || | |||| ||||| ||||| ||||||||||| |||| |||||||||| Sbjct 205 CCGCTTGCG-GCGAAGGTTGCCGAAATCCGCCGCTGGCATGTCCAGGACAACGGCTGGAA 147 Query 11860 CGATATCGGATACCACTATCTCATCGACCGCGACGGGCATTGCGCCAT---GGGCCG-GC 11915 |||||||| ||||||| ||||||| ||||| || || | || |||||| || Sbjct 146 GGATATCGGCTACCACTGGATCATCGATCGCGATGG---TTCGGTGATGTCGGGCCGCGC 90 Query 11916 CGCTGGCACGGATCGGCGCGCATGTGCGC-GGCCACAATACCGGCACGATCGGGCTTTGC 11974 || | | |||||| |||||||| ||| |||||||| ||| || || || | ||| Sbjct 89 CG-AGACTGTGATCGGGGCGCATGT-CGCTGGCCACAACCGCGGGACCATTGGTATCTGC 32 Query 11975 CTGATCGGCGGTCACGG 11991 || |||| || || || Sbjct 31 ATGCTCGGTGGGCATGG 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123686705224520