Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031065.1 Length=159878 Score E Sequences producing significant alignments: (Bits) Value seq5 168 7e-37 >seq5 Length=869209 Score = 168 bits (186), Expect = 7e-37 Identities = 286/408 (70%), Gaps = 10/408 (2%) Strand=Plus/Minus Query 132589 TGCAGACCATAATCTAGATGACGAATACGGTTTTCATCTACACCTTTGTTGTTCTTTAAT 132648 |||| ||||| || ||||| | | ||||| || |||||||| ||| || || | | Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 132649 ACAAGCAGGTTTTCAACTTCTAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 132708 || ||||| ||| ||||| |||||||||| || || | || || || ||||||||| Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 132709 CGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAAAAAGGAATT 132768 || ||||||||||| || || ||||||||| ||||| ||||| || |||| || || Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 132769 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 132828 ||||||||| |||||||||||| ||| ||| ||| ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 132829 GCGTTGATGCCTATACCAGCTCGCTTGCTGATA--TACTTAATAAT---ACTGTTACTTG 132883 ||||| || || ||||| || ||| ||| || | || || | ||| |||| | || Sbjct 710916 GCGTTAATACCAATACCTGCGCGC-TGC-GACACGTATTTTACAATGGCACTG-GAGGTG 710860 Query 132884 CCGCATTAATAGAATTCAGTGAATCGCCAGCTTCGATAACTACACAAGAACTAAATTGAC 132943 ||||| || |||| ||| || ||| || || | ||| || || || || |||| Sbjct 710859 --GCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGAC 710802 Query 132944 GAGTAGGAGTACGAGCCCCCGCCATAATTGGTGTAGGTAATGAAATCT 132991 | || || ||||| | |||| |||||| ||||| || | |||||||| Sbjct 710801 GGGTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510329257529280