Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq6372 284 7e-72 seq26 141 5e-29 seq163424 123 1e-23 >seq6372 Length=86001 Score = 284 bits (314), Expect = 7e-72 Identities = 545/792 (69%), Gaps = 21/792 (3%) Strand=Plus/Minus Query 794 GACCTGTTGCGCGACATCCTGGAGACTGGCAAGTCGAAGGATGATCGCACCGGCACCGGC 853 |||||| ||||| || | | ||| |||| | ||||| || || |||||||| ||| Sbjct 39846 GACCTGATGCGCCACGTGCGTGAGCACGGCACCTTCAAGGAAGACCGTACCGGCACGGGC 39787 Query 854 ACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGGGCTTCCCGCTGGTC 913 || ||| ||||||| |||| |||| | |||||| |||| || ||||| | ||| Sbjct 39786 ACCTACAGCGTGTTCGGCTACCAGATGCGTTTCGACCTGGCCGATGGTTTCCCCATCGTC 39727 Query 914 ACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTTCTGTGGTTCCTCAGTGGC 973 ||||| ||| |||| | ||| | |||| || |||||||||||| ||| Sbjct 39726 ACCACCAAGAAGTGCCACCTGCGCTCGATCATCCACGAGCTGCTGTGGTTCCTCCAGGGC 39667 Query 974 GACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATCTGGGACGAGTGGGCCGAC 1033 ||||| ||| | ||| ||||| ||||||||||||| |||||||||||||||||||||| Sbjct 39666 GACACCAACATCAAGTACCTCAAGGACAACGGCGTCAGCATCTGGGACGAGTGGGCCGAC 39607 Query 1034 GCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGGCACTGGCATGTCGAGGAC 1093 | ||| |||||||| || ||||||||| |||||||| ||||| | || Sbjct 39606 GAGAACGGCAACCTCGGCCCGGTCTACGGCTACCAGTGGCGCAGCTGGCCGGCGCCCAAC 39547 Query 1094 GGAGGATCGTCGTGGATTGACCAGATCTCGGCCGC-CGTGGAGCTGCTTCGCGAGGACCC 1152 || | || || ||||||||| | || || ||| || | ||| |||| Sbjct 39546 GGCG------AGTCCATCGACCAGATC-AGCAAGCTGGTCGAGATGATCCGCAGCAACCC 39494 Query 1153 TGACTCGCGCCGGAACGTGGTATCCGCATGGAA--CGTCGGTGACCTCAGCGACATGGCA 1210 ||||||||||| | || || || ||||| || || || | ||| | ||||| Sbjct 39493 GGACTCGCGCCGTCTGATCGTCTCGGCCTGGAACCCGGCGCTGGTC-GAGC-AGATGGCG 39436 Query 1211 CTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTG-CA 1269 || | || || || |||||||| | ||||||| ||||||| ||| || ||| || Sbjct 39435 CTGCCGCCCTGTCATGCGCTGTTCCAGTTCTACGTCGCCGACGGCAAGCTGTC-CTGCCA 39377 Query 1270 GGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGC 1329 | ||||||||||| |||||||| |||||||| ||||| ||||| |||||| ||||| Sbjct 39376 GCTCTACCAGCGCTCGGCGGACATCTTCCTCGGCGTGCCCTTCAACATCGCCAGCTACGC 39317 Query 1330 GCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGAC 1389 || || ||| ||| | |||||| |||||||| | ||| ||| | |||||||| Sbjct 39316 CCTGCTGACGCTGATGGTGGCGCAGGTCTGCGGCCTGCAGCCGGGCGAGTTCATCTGGAC 39257 Query 1390 CGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCG 1449 |||||| ||||||||| | ||| ||||||| |||| ||| | ||||||| ||| Sbjct 39256 CGGCGGTGACTGCCACCTGTACGCCAACCACATCGAGCAGACCGACCTGCAGCTGACCCG 39197 Query 1450 ACGACCGCGGCCCTACCCGAGGCTCGTGCTACACCACGCGCCGTC---GATCT--TCGAC 1504 | |||| ||| ||||| | ||| ||| || | ||| || || | | Sbjct 39196 TCAGCCGCTGCCGCTGCCGAGCATGAAGCTGAACCCCGAG--GTCAGGGACCTGCTGGCG 39139 Query 1505 TACCGGTACGAGCACATCCACCTCGTGAACTACGACCCGCACCCGTCGATCAAGGCGCCG 1564 | | ||| |||| || || | || || || || | || ||| |||||||||||| Sbjct 39138 TTCAGGTTCGAGGACTTCGAGCTGGTCGGTTATGAGGCCCATCCGCACATCAAGGCGCCG 39079 Query 1565 GTGGCCGTCTGA 1576 || || |||||| Sbjct 39078 GTCGCGGTCTGA 39067 >seq26 Length=549101 Score = 141 bits (156), Expect = 5e-29 Identities = 287/415 (69%), Gaps = 16/415 (4%) Strand=Plus/Plus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAA-GTTCGGCGCCCAGCTGCGGTACGACCTCAC 894 || ||||||||||||||||| || | ||||||| |||| |||| | |||||| | Sbjct 240152 GACCGCACCGGCACCGGCAC-CTACTCGGTGTTCGGCCACCAGATGCGCTTCGACCTGGC 240210 Query 895 CGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACT 954 ||| ||||||||| || | ||||| ||| | ||| | || ||| | ||||||| Sbjct 240211 CGAAGGCTTCCCGGTGCTGACCACCAAGAAGCTGCACCTGAAGTCGATCATCCACGAACT 240270 Query 955 TCTGTGGTTCCT-CAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCA 1013 ||||||||||| ||| |||||||| ||| | || || || ||||||| || Sbjct 240271 GCTGTGGTTCCTGCAG-GGCGACACCAACATCCGCTACCTGAAGGAACACGGCGTGCGCA 240329 Query 1014 TCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGC 1073 ||||||||||||||||||||| ||| ||||||| || ||||||||| ||||||| Sbjct 240330 TCTGGGACGAGTGGGCCGACGAGAACGGCGACCTCGGACCGGTCTACGGCTACCAGTGGC 240389 Query 1074 GGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGG 1133 | ||||| ||| |||| | || | || ||||||||| | ||| Sbjct 240390 GCTCCTGGC----CGACACCGGACGGACGCC--ACATCGACCAGATCAGCAAGGTGCTGG 240443 Query 1134 AGCTGCTTCGCGAGGAC-CCTGACTCGCGCCGGAACGTGGTATCCGCATGGAA--CGTCG 1190 || || | || | | || || |||||||||||| | | || ||| ||||| || | Sbjct 240444 AGATGATCCG-GCGCACGCCGGACTCGCGCCGGCTCATCGTCAGCGCCTGGAACCCGGCA 240502 Query 1191 GTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGT 1245 || || ||||||||| || | || |||||| | |||||||| | ||||| Sbjct 240503 CTG--GTCGACGACATGGCGCTGCCGCCCTGCCACGCCCTGTTCCAGTTCTACGT 240555 >seq163424 Length=1083 Score = 123 bits (136), Expect = 1e-23 Identities = 205/291 (70%), Gaps = 4/291 (1%) Strand=Plus/Plus Query 794 GACCTGTTGCGCGACATCCTGGAGACTGGCAAGTCGAAGGATGATCGCACCGGCACCGGC 853 |||||| ||||| || | | |||| |||| | ||| ||||||||||||||||||| Sbjct 714 GACCTGATGCGCCACGTGCGCGAGAACGGCACCTTTAAGAGTGATCGCACCGGCACCGGC 773 Query 854 ACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACCGAGGGCTTCCCGCTGGTC 913 || || ||| ||| ||| |||| | || || |||||||||| |||||||| Sbjct 774 ACTTACAGTGTGTTTGGCCATCAGATGCGCTTTGATCTGGCCGAGGGCTTTCCGCTGGTG 833 Query 914 ACCACGAAG-CGCGTCCACTTCAAATCGGTTGCGTACGAACTTCTGTGGTTCCT-CAGTG 971 ||||| ||| | || || |||| || | |||| || |||||||| | ||| | Sbjct 834 ACCACCAAGAAGTGT-CATCTCAAGTCCATCATCCACGAGCTGCTGTGGTTTTTGCAG-G 891 Query 972 GCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATCTGGGACGAGTGGGCCG 1031 |||| || ||| | | || || || ||||||||| ||||||||||||||||||| | Sbjct 892 GCGATACCAACATCCGGTATCTGAAGGAAAACGGCGTCTCCATCTGGGACGAGTGGGCAG 951 Query 1032 ACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGGCACTGGC 1082 ||| || |||| || || ||||| ||| |||||||| ||||| Sbjct 952 ACGAGAATGGCGACCTGGGGCCGGTCTATGGCTATCAGTGGCGCAGCTGGC 1002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295480710432636