Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq549 80.6 7e-11 >seq549 Length=260093 Score = 80.6 bits (88), Expect = 7e-11 Identities = 134/194 (69%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 28631 ACCGATACCAAACTGAAAAACCTGAAGCCTCAGGACAAACTCTATAAAGTTTCTGACCGT 28690 ||||||||||| ||| ||||| ||||| ||||||| ||||| || || ||||||| Sbjct 5932 ACCGATACCAAGCTGCGCAACCTCAAGCCGAAGGACAAGCTCTACAAGGTGAATGACCGT 5873 Query 28691 GACGGGCTGTACGTAGCCGTGCTCATATCAGGCTCTGTCTCGTTCCGCTATGACTACAGA 28750 ||||| || || |||||||| | || | ||||||||||||| ||||| Sbjct 5872 GACGGCCTCTATGTAGCCGTCACGGCCGCCGGAGCGATCTCGTTCCGCTACAACTACTCG 5813 Query 28751 ATCAACGGCCGCCGGGAAACTCTGGTGATTGGTCAGTATGGTCGTGACGGTATCAGCCTG 28810 ||| |||| | | ||| || | | || | || ||| | ||| |||| |||| Sbjct 5812 ATCCACGGTAGACAGGAGACCATCACCTTCGGCCGCTACGGTGTCGGCGGCATCACCCTG 5753 Query 28811 GCGGAAGCGCGGGA 28824 |||||||| || || Sbjct 5752 GCGGAAGCCCGCGA 5739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133224647357104