Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031085.1 Length=166634 Score E Sequences producing significant alignments: (Bits) Value seq5 123 3e-23 seq5373 93.3 4e-14 seq457 82.4 8e-11 >seq5 Length=869209 Score = 123 bits (136), Expect = 3e-23 Identities = 269/403 (67%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 140485 TGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACACCTTTGTTATTTTTCAAA 140544 || || ||||| |||| ||| | | ||||| ||||||||||| ||||||||||| Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 140545 ACAAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 140604 || || || ||| ||||||| |||||| | || || | || || || || ||| Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 140605 CGAATTCCACCTTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 140664 || | || ||||| ||||| ||| || || ||||| ||||| || |||| || ||| Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 140665 ACACCAGTATGACGTACTTCACCCATGCCAATCTTAGAACCTTCGGCACGAATCATACCA 140724 ||||||||| |||| || | | || |||| || ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 140725 ACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTTA 140784 ||||||||||||| || ||||| | || | |||| ||||| | | ||| | | Sbjct 710916 GCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCA 710857 Query 140785 TTGATAGACTTTAATGAATCACCTGCCTCAATAACAACACATGAACTAAACTGTCGAGTC 140844 ||||| || | | ||||| |||||| | || || || || ||||| || || Sbjct 710856 TTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTT 710797 Query 140845 GGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGAAATCT 140887 || ||||| || | ||||||||| || || | |||||||| Sbjct 710796 GGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 >seq5373 Length=95907 Score = 93.3 bits (102), Expect = 4e-14 Identities = 121/164 (74%), Gaps = 9/164 (5%) Strand=Plus/Plus Query 70293 AATTGGTCGAGGCAGTAGGGATCGAACCTACGACCTA--GGACTTAGA--AGGTCCTTGC 70348 || |||||| |||||||| |||||||||||||| || | | | |||| || Sbjct 61884 AAATGGTCGGAGCAGTAGGATTCGAACCTACGACCCCCTGGTCCCAAACCAGGT----GC 61939 Query 70349 TCTTCCTT-CTGAGCTATGCCCCGTAATTGGGGTGACCGATGGGAGTCGAACCCATGACT 70407 || || ||| ||||||| ||| ||||||||||| || |||| |||||||| ||| Sbjct 61940 ACTACCAGGCTGTGCTATGCTCCGAAATTGGGGTGAATGACGGGATTCGAACCCGCGACA 61999 Query 70408 ACGAGAATCACAATCTCGAGTTCTACCAACTGAACTACGGCCAC 70451 || ||||||||||| | | |||||||||||| |||| |||| Sbjct 62000 ACTGGAATCACAATCCAGGGCTCTACCAACTGAGCTACATCCAC 62043 >seq457 Length=273712 Score = 82.4 bits (90), Expect = 8e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 70580 GGATTCGAACCATGGACCAATTGATTAACAGTCAACTGCTCTACCACTGAGCTAC 70634 |||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct 198094 GGATTCGAACCAGCGACCAATTGGTTAACAGCCAACTGCTCTACCACTGAGCTAC 198040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531899750552640