Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031087.1 Length=168272 Score E Sequences producing significant alignments: (Bits) Value seq5 212 7e-50 >seq5 Length=869209 Score = 212 bits (234), Expect = 7e-50 Identities = 328/466 (70%), Gaps = 2/466 (0%) Strand=Plus/Minus Query 141200 GGGACTAAACAGAGTGATGTAATCATTCTTAATCAAACGTTCAATCATCAGGTTATTAAT 141259 ||| || |||| ||||| || |||| ||||||| || | | ||||||| |||| Sbjct 711217 GGGGCTGAACAAGGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGGCGGTTAAA 711158 Query 141260 CTGAACGCCATAATCTAAATGACGAATACGGTTTTCATCTACACCTTTGTTGTTCTTAAG 141319 ||| |||||||| || | ||| | | ||||| || |||||||| ||| || || || Sbjct 711157 CTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAG 711098 Query 141320 TACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGTCGCCGCGCCACC 141379 ||| || || ||| ||||||| ||||| | || ||| |||| || || || ||||| Sbjct 711097 TACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACC 711038 Query 141380 ACGGACTCCACCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGTTTCCAGAAAGGAAT 141439 ||| || || ||||| |||||| ||| ||||| || ||||| || || | || || || Sbjct 711037 ACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGAT 710978 Query 141440 AACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCCTCGGCGCGAATCATGCC 141499 | |||||||| | |||| || | ||| ||| |||||||| ||| Sbjct 710977 ACAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCC 710918 Query 141500 TGCATTAATACCAATACCTGCACGCTTACTGATGTATTTCGTAATTGATGCAGCAGCT-T 141558 ||| ||||||||||||||||| |||| | |||||| || || | | || | Sbjct 710917 TGCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAA-TGGCACTGGAGGTGG 710859 Query 141559 CGTTAATTGAATTAAGACTATCACCACCTTCAATAACCACGCATGAACTGAACTGGCGTG 141618 | || || |||| || || ||||||| ||||| | ||||| || |||||||| || | Sbjct 710858 CATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGG 710799 Query 141619 TCGGAGTACGAACACCAGACATAATTGGTGTTGGCAATGAAATCTT 141664 | || ||||| || || |||||||| ||||| |||| ||||||||| Sbjct 710798 TTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCTT 710753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537129541489920