Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031090.1 Length=169621 Score E Sequences producing significant alignments: (Bits) Value seq5 104 3e-17 >seq5 Length=869209 Score = 104 bits (114), Expect = 3e-17 Identities = 219/326 (67%), Gaps = 3/326 (1%) Strand=Plus/Plus Query 61915 ATCGGTATGGGCGAAGTTCGACATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACT 61974 ||| ||| ||||||| ||||| || ||| || || | || |||||||| || Sbjct 710945 ATCCGTAATGGCGAAGCCTTTCATACTGGCTGTATCCCGTTTTATAAGCATTTCCAGACC 711004 Query 61975 GCAGTAAAATCTTGTTCTCAAGGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCG 62034 ||||||||| || || ||||| ||| | ||||||||||| || || || || || Sbjct 711005 GCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCCTGTTCTACCCC 711064 Query 62035 ATGTGGCACTTAGAAGTAGAGAACCTATTAGTTCTGAAAAATAACAAAGGCGTGGATGAA 62094 ||||||| | ||||| || || | || |||||||||||| || || || || Sbjct 711065 TTGTGGCATCTGGAAGTGGAATCGCTGCTGGTACTGAAAAATAACCGCGGTGTAGAAGAG 711124 Query 62095 AACCGTATTCGACATATGGACTACGGAATTCAGATTAATGACCTTATGATGGAACGCCTT 62154 ||||| | | ||| ||||||| || | ||| |||| ||| ||| | ||||| Sbjct 711125 AACCGGGTAAGGCATCTGGACTATGGCGTGCAGTTTAACCGCCTGATGTATCAGCGCCTG 711184 Query 62155 GGTAAAAATGATTATATTACTTTATTTAGCCCTCACGAAATGTCAGGCGAACTATACTAC 62214 |||| |||| ||||| || || || ||||| || || | || || || | Sbjct 711185 ATTAAAGATGACTATATCACCTTGTTCAGCCCCTCTGATGTGCCGGG---GCTGTATGAT 711241 Query 62215 TCGTTCTTTGAAGATCAAGATAAATT 62240 | |||||||||||||| || || || Sbjct 711242 GCCTTCTTTGAAGATCAGGAAAAGTT 711267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541436615955360