Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq5 123 3e-23 seq100896 84.2 2e-11 >seq5 Length=869209 Score = 123 bits (136), Expect = 3e-23 Identities = 269/403 (67%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 138416 TGAACGCCATAATCCATATGACGAATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 138475 || |||||||| |||| ||| | | ||||| |||||||| || ||||||||||| Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 138476 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138535 || || || ||| ||||||| |||||| | || || | || || || || ||| Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 138536 CGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAATA 138595 || | || || || ||||| ||| || || ||||| ||||| || |||| || ||| Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 138596 ACACCAGTATGACGTACTTCACCTGTACCAATCTTAGAACCTTCGGCACGAATCATACCA 138655 ||||||||| |||| || ||| || |||| || ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 138656 ACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTGAAGCAGAAGCTTTG 138715 ||||||||||||| || ||||| | || | |||| ||||| | | || | Sbjct 710916 GCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGCA 710857 Query 138716 TTAATAGACTTCAGCGAATCACCTGCTTCAATAACAACGCATGAACTAAACTGCCGAGTT 138775 || || || | ||| ||||| ||||| | ||||| || || ||||| || ||| Sbjct 710856 TTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTT 710797 Query 138776 GGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGAAATCT 138818 || ||||| || | ||||||||| || || | |||||||| Sbjct 710796 GGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 >seq100896 Length=2131 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 137468 GGCACGACTTGATTAAAGGAACCCTCTTTTGATTCTTTAACAGAGACTGGTCCACGTGGA 137527 ||||| ||||| || ||| ||| ||||| | |||||||| || | |||||||| Sbjct 140 GGCACTACTTGCTTTAAGATACCATCTTTACTTGCTTTAACACTGATATGACCACGTGGT 81 Query 137528 GGCTCGATACCGTTTGTACTGTTAGAAACTTGGGAAGATGACTCACATGGCATAAGTGCT 137587 ||||||||||| ||||| |||||| | ||| || |||| ||| | |||||||| || Sbjct 80 GGCTCGATACCATTTGTCGCGTTAGAGATTTGCGATGATGTCTCTGAAGGCATAAGGGCA 21 Query 137588 GATA 137591 |||| Sbjct 20 GATA 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529147565089920