Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031117.1 Length=44885 Score E Sequences producing significant alignments: (Bits) Value seq100 86.0 2e-12 >seq100 Length=411593 Score = 86.0 bits (94), Expect = 2e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 32345 AAAGCTATAGCAAAAGAATTTGATTGTCCTGTTTTTTGTTTAGCGCAATTAAGCCGAAGC 32404 ||||| ||||||||||| | | || ||||| || ||| | || | | |||||| Sbjct 332074 AAAGCATTAGCAAAAGAAATGAACTGCCCTGTAATTGCATTATCTCAGCTCAACCGAAGT 332015 Query 32405 TTAGAATCCAGAAAAGATAGACGACCTCTAATGTCTGACATTCGTGAGTCGGGATCTATT 32464 | ||| | | | | |||||| ||||||||||| | ||||| || ||| | || Sbjct 332014 CTGGAAAATCGCCCAAACAAACGACCAGTAATGTCTGACTTGCGTGAATCTGGAGCGATC 331955 Query 32465 GAAGAGGACGCAGATGTGATCATGTTTATATATCGTGATGAGTATTATGATAAAAACTCA 32524 || | || || ||| |||| |||||||| |||||||||||| |||| | ||| | || Sbjct 331954 GAGCAAGATGCCGATTTGATTATGTTTATTTATCGTGATGAGGTTTATAACAAAGAATCT 331895 Query 32525 AAGGATCAAGGTATTGCTGAAATAATTGTAGCTAAAGCGCGTGATGG 32571 || || || | || ||||| || | | |||| |||| |||| Sbjct 331894 AAAGAGGCTGGAACAGCAGAAATCATCATTGGTAAACAGCGTAATGG 331848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143203244332104