Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031118.1 Length=54167 Score E Sequences producing significant alignments: (Bits) Value seq1 109 2e-19 >seq1 Length=1655743 Score = 109 bits (120), Expect = 2e-19 Identities = 256/379 (68%), Gaps = 18/379 (5%) Strand=Plus/Minus Query 3605 TGCGGATCAACTCTCCCGGCGGCGACGTCTACGACGCGATCGCCATCACCAACGCGCTGC 3664 ||||| | ||| ||||||||| |||| ||||||| |||| ||| ||| ||| | Sbjct 161229 TGCGGCTGAACAGCCCCGGCGGCTCGGTCTTCGACGCGGTCGCGATCCACAATGCGAT-- 161172 Query 3665 GCAA---CCACGACGCGACGATCACCGTCCAGGTCGACGGTCTCGCCGCGTCGGCGGCCA 3721 ||| |||||| | ||| |||| ||| | |||||||| ||||||| ||||| ||| Sbjct 161171 -CAAGCGCCACGAGGGCACGGTCACGGTCTGGATCGACGGTATCGCCGCCTCGGCCGCCT 161113 Query 3722 GCTTCATCGCGATGGCCGGCGACGAGGTGGTGATGTGCCGCAACACCGAGATGATGATCC 3781 || |||||||||||| ||||||||| | || ||| | ||| || ||||||||| Sbjct 161112 CCTACATCGCGATGGCGGGCGACGAGATCGTCATGCCCGAGAACGCCTTCCTGATGATCC 161053 Query 3782 ATGACGCCCGT--GGCTTCTGCATCGGCAACGCCACCGACATGGCCGAGTACGCCGAGTG 3839 | || ||||| ||| || || |||| ||| |||||| || |||||| Sbjct 161052 ACGA--CCCGTCCGGCCTCGTGATGGGCACGGCCGAGGACATGCGCGCCATGGCCGAGGC 160995 Query 3840 GCTCGGCCGCGCGAGCGACAACATCGCCTCGATGTACGCCGAGAAGACCGGCGGTGA--- 3896 ||||| | | || | || | ||| ||| || |||| ||| ||||| | || Sbjct 160994 GCTCGACAAGGTGAAGGGCAGCCTCGTCTCCGGCTATGCCGCGAAATCCGGCCG-GACGC 160936 Query 3897 -GGTGAAGGACTGGCGCAAGGCGATGACGGCCGAGACCTGGTACACGGCGGAGGAAGCCG 3955 || | ||| || ||| | ||| | ||||||||||||| | || ||| |||| Sbjct 160935 CGGAGGAGGTCT-CCGC--GCTCATGGCCGCCGAGACCTGGTTCGACGCATCGGACGCCG 160879 Query 3956 TCGAGGCGGGTCTCGCCGA 3974 ||| | ||| ||||||| Sbjct 160878 TCGCGCAGGGCTTCGCCGA 160860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172842072211128